STRINGSTRING
LOC102780385 LOC102780385 LOC102799546 LOC102799546 ENSNBRP00000005180 ENSNBRP00000005180 LOC102798705 LOC102798705 LOC102785374 LOC102785374 ENSNBRP00000003053 ENSNBRP00000003053 LOC102795247 LOC102795247 ENSNBRP00000001204 ENSNBRP00000001204 LOC102793541 LOC102793541 ENSNBRP00000002642 ENSNBRP00000002642 LOC102776387 LOC102776387 LOC102792666 LOC102792666 LOC102777593 LOC102777593 LOC102777770 LOC102777770 LOC102779180 LOC102779180 LOC102793844 LOC102793844 LOC102783213 LOC102783213 LOC102800054 LOC102800054 ENSNBRP00000024306 ENSNBRP00000024306 LOC102799628 LOC102799628 LOC102785870 LOC102785870 LOC102785041 LOC102785041 LOC102799639 LOC102799639 ENSNBRP00000029940 ENSNBRP00000029940 ENSNBRP00000008297 ENSNBRP00000008297
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102780385Transcription initiation factor TFIID subunit 10; TFIID is a multimeric protein complex that plays a central role in mediating promoter responses to various activators and repressors; Belongs to the TAF10 family. (186 aa)
LOC102799546TATA box binding protein. (251 aa)
ENSNBRP00000005180Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (123 aa)
LOC102798705Uncharacterized protein. (324 aa)
LOC102785374General transcription factor IIB. (289 aa)
ENSNBRP00000003053TFIIB-type domain-containing protein. (215 aa)
LOC102795247CBFD_NFYB_HMF domain-containing protein. (119 aa)
ENSNBRP00000001204Uncharacterized protein. (50 aa)
LOC102793541General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (428 aa)
ENSNBRP00000002642Uncharacterized protein. (155 aa)
LOC102776387Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (503 aa)
LOC102792666General transcription factor IIH, polypeptide 3. (300 aa)
LOC102777593Uncharacterized protein. (161 aa)
LOC102777770DR1-associated protein 1 (negative cofactor 2 alpha). (196 aa)
LOC102779180General transcription factor IIE, polypeptide 1, alpha. (330 aa)
LOC102793844Small nuclear RNA activating complex, polypeptide 5. (119 aa)
LOC102783213Down-regulator of transcription 1. (176 aa)
LOC102800054Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (286 aa)
ENSNBRP00000024306General transcription factor IIA, 1. (319 aa)
LOC102799628Transcription initiation factor TFIID subunit. (1823 aa)
LOC102785870Dr1-associated corepressor-like. (196 aa)
LOC102785041TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (638 aa)
LOC102799639TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (317 aa)
ENSNBRP00000029940TAF domain-containing protein. (77 aa)
ENSNBRP00000008297Uncharacterized protein. (262 aa)
Your Current Organism:
Neolamprologus brichardi
NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid
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