(63 nodes) SCF ubiquitin ligase complex network (Neolamprologus brichardi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102776382	F-box and leucine-rich repeat protein 17. (448 aa)
	LOC102788808	F-box and leucine-rich repeat protein 5. (688 aa)
	LOC102794513	F-box protein 31. (622 aa)
	FBXL14	F-box and leucine rich repeat protein 14. (402 aa)
	ENSNBRP00000032114	Uncharacterized protein. (416 aa)
	LOC102780320	Leucine rich repeat containing 29. (580 aa)
	LOC102787920	Cullin 2; Belongs to the cullin family. (706 aa)
	ENSNBRP00000017740	F-box and leucine-rich repeat protein 15. (297 aa)
	LOC102783635	F-box and WD repeat domain containing 8. (489 aa)
	LOC102797634	F-box protein 4. (355 aa)
	ENSNBRP00000018389	F-box domain-containing protein. (398 aa)
	LOC102787480	Zgc:175088. (176 aa)
	LOC102784833	Ring-box 1, E3 ubiquitin protein ligase. (107 aa)
	LOC102784940	Dynein assembly factor with WDR repeat domains 1. (404 aa)
	ENSNBRP00000003365	CS domain-containing protein. (124 aa)
	LOC102799192	SplA/ryanodine receptor domain and SOCS box containing 3a. (402 aa)
	ENSNBRP00000002984	Uncharacterized protein. (420 aa)
	LOC102787937	Calcyclin binding protein. (215 aa)
	LOC102791803	F-box and leucine-rich repeat protein 6. (525 aa)
	LOC102789483	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (78 aa)
	LOC102796891	F-box protein 25. (355 aa)
	LOC102799357	F-box protein 7. (488 aa)
	LOC102777541	F-box and leucine-rich repeat protein 22. (228 aa)
	LOC102775902	Cyclin F; Belongs to the cyclin family. (775 aa)
	ENSNBRP00000030102	SplA/ryanodine receptor domain and SOCS box containing 4a. (265 aa)
	LOC102794753	F-box domain-containing protein. (153 aa)
	LOC102790187	F-box and leucine-rich repeat protein 20. (422 aa)
	LOC102781812	Zgc:158376. (836 aa)
	LOC102781202	F-box domain-containing protein. (434 aa)
	LOC102782496	F-box DNA helicase 1. (986 aa)
	LOC102798721	F-box protein 4. (276 aa)
	LOC102781567	F-box domain-containing protein. (427 aa)
	LOC102792498	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (76 aa)
	ENSNBRP00000001810	Non-specific cytotoxic cell receptor protein 1. (233 aa)
	LOC102780497	F-box and leucine-rich repeat protein 14a. (408 aa)
	LOC102790974	Si:ch1073-228b5.2. (203 aa)
	LOC102794320	F-box and leucine-rich repeat protein 3a. (437 aa)
	LOC102786088	Si:ch1073-228j22.2. (291 aa)
	LOC102794008	Transmembrane protein 183A. (361 aa)
	LOC102788282	F-box and leucine-rich repeat protein 3, like. (426 aa)
	LOC102778533	F-box protein 9. (424 aa)
	LOC102779701	F-box protein 45. (289 aa)
	LOC102777085	Si:dkey-192l18.9. (443 aa)
	LOC102777393	Ubiquitin specific peptidase 47; Belongs to the peptidase C19 family. (1358 aa)
	LOC102795626	F-box and leucine-rich repeat protein 16. (501 aa)
	LOC102779532	F-box and leucine-rich repeat protein 2. (432 aa)
	LOC102800136	SplA/ryanodine receptor domain and SOCS box containing 3b. (318 aa)
	LOC102789109	FBA domain-containing protein. (241 aa)
	LOC102780984	Uncharacterized protein. (273 aa)
	LOC102787464	F-box protein 32. (358 aa)
	LOC102798449	F-box and leucine-rich repeat protein 18. (721 aa)
	LOC102800092	F-box protein 33. (492 aa)
	ENSNBRP00000012128	Cullin 1b; Belongs to the cullin family. (343 aa)
	LOC102783924	F-box and WD repeat domain containing 11b. (527 aa)
	LOC102799157	F-box domain-containing protein. (447 aa)
	LOC102778793	Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function. (82 aa)
	LOC102780954	SplA/ryanodine receptor domain and SOCS box containing 1. (273 aa)
	LOC102794103	S-phase kinase-associated protein 1; Belongs to the SKP1 family. (163 aa)
	hagoromo	F-box and WD repeat domain containing 4. (363 aa)
	LOC102780792	F-box and leucine-rich repeat protein 4. (612 aa)
	LOC102784528	F-box and WD repeat domain containing 5. (609 aa)
	LOC102783705	S-phase kinase-associated protein 2, E3 ubiquitin protein ligase. (417 aa)
	LOC102781814	F-box protein 42. (699 aa)

Your Current Organism:

Neolamprologus brichardi

NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNBRP00000001810	ENSNBRP00000012128	ENSNBRP00000001810	ENSNBRP00000012128	Non-specific cytotoxic cell receptor protein 1.	Cullin 1b; Belongs to the cullin family.	0.893
ENSNBRP00000001810	LOC102783635	ENSNBRP00000001810	ENSNBRP00000017879	Non-specific cytotoxic cell receptor protein 1.	F-box and WD repeat domain containing 8.	0.572
ENSNBRP00000001810	LOC102783705	ENSNBRP00000001810	ENSNBRP00000008128	Non-specific cytotoxic cell receptor protein 1.	S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.	0.807
ENSNBRP00000001810	LOC102783924	ENSNBRP00000001810	ENSNBRP00000011401	Non-specific cytotoxic cell receptor protein 1.	F-box and WD repeat domain containing 11b.	0.786
ENSNBRP00000001810	LOC102784833	ENSNBRP00000001810	ENSNBRP00000004575	Non-specific cytotoxic cell receptor protein 1.	Ring-box 1, E3 ubiquitin protein ligase.	0.762
ENSNBRP00000001810	LOC102787920	ENSNBRP00000001810	ENSNBRP00000016823	Non-specific cytotoxic cell receptor protein 1.	Cullin 2; Belongs to the cullin family.	0.459
ENSNBRP00000001810	LOC102794103	ENSNBRP00000001810	ENSNBRP00000010054	Non-specific cytotoxic cell receptor protein 1.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.959
ENSNBRP00000001810	LOC102797634	ENSNBRP00000001810	ENSNBRP00000018257	Non-specific cytotoxic cell receptor protein 1.	F-box protein 4.	0.658
ENSNBRP00000001810	LOC102798721	ENSNBRP00000001810	ENSNBRP00000000189	Non-specific cytotoxic cell receptor protein 1.	F-box protein 4.	0.658
ENSNBRP00000001810	LOC102799357	ENSNBRP00000001810	ENSNBRP00000022498	Non-specific cytotoxic cell receptor protein 1.	F-box protein 7.	0.570
ENSNBRP00000002984	ENSNBRP00000012128	ENSNBRP00000002984	ENSNBRP00000012128	Uncharacterized protein.	Cullin 1b; Belongs to the cullin family.	0.908
ENSNBRP00000002984	ENSNBRP00000032114	ENSNBRP00000002984	ENSNBRP00000032114	Uncharacterized protein.	Uncharacterized protein.	0.422
ENSNBRP00000002984	LOC102778533	ENSNBRP00000002984	ENSNBRP00000015744	Uncharacterized protein.	F-box protein 9.	0.429
ENSNBRP00000002984	LOC102779701	ENSNBRP00000002984	ENSNBRP00000015477	Uncharacterized protein.	F-box protein 45.	0.469
ENSNBRP00000002984	LOC102783705	ENSNBRP00000002984	ENSNBRP00000008128	Uncharacterized protein.	S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.	0.620
ENSNBRP00000002984	LOC102783924	ENSNBRP00000002984	ENSNBRP00000011401	Uncharacterized protein.	F-box and WD repeat domain containing 11b.	0.650
ENSNBRP00000002984	LOC102784833	ENSNBRP00000002984	ENSNBRP00000004575	Uncharacterized protein.	Ring-box 1, E3 ubiquitin protein ligase.	0.887
ENSNBRP00000002984	LOC102794103	ENSNBRP00000002984	ENSNBRP00000010054	Uncharacterized protein.	S-phase kinase-associated protein 1; Belongs to the SKP1 family.	0.963
ENSNBRP00000002984	LOC102794753	ENSNBRP00000002984	ENSNBRP00000026407	Uncharacterized protein.	F-box domain-containing protein.	0.508
ENSNBRP00000002984	LOC102798449	ENSNBRP00000002984	ENSNBRP00000013093	Uncharacterized protein.	F-box and leucine-rich repeat protein 18.	0.400