11 items (Neolamprologus brichardi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102783051	DEAD (Asp-Glu-Ala-Asp) box helicase 21. (752 aa)
	LOC102796730	Excision repair cross-complementation group 6. (1412 aa)
	LOC102776319	Androgen receptor. (763 aa)
	LOC102781713	Splicing factor 3b, subunit 1. (1281 aa)
	LOC102795791	Regulatory associated protein of MTOR, complex 1. (1249 aa)
	LOC102783590	Interactor of little elongator complex ELL subunit 2. (830 aa)
	LOC102795905	Uncharacterized protein. (686 aa)
	ENSNBRP00000026510	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family. (2423 aa)
	LOC102788212	Uncharacterized protein. (1059 aa)
	LOC102796038	BRF1 RNA polymerase III transcription initiation factor subunit. (610 aa)
	LOC102778616	BRF1 RNA polymerase III transcription initiation factor subunit b. (622 aa)

Your Current Organism:

Neolamprologus brichardi

NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNBRP00000026510	LOC102776319	ENSNBRP00000026510	ENSNBRP00000019409	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	Androgen receptor.	0.510
ENSNBRP00000026510	LOC102795791	ENSNBRP00000026510	ENSNBRP00000023060	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	Regulatory associated protein of MTOR, complex 1.	0.999
ENSNBRP00000026510	LOC102795905	ENSNBRP00000026510	ENSNBRP00000025696	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	Uncharacterized protein.	0.510
LOC102776319	ENSNBRP00000026510	ENSNBRP00000019409	ENSNBRP00000026510	Androgen receptor.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.510
LOC102776319	LOC102795791	ENSNBRP00000019409	ENSNBRP00000023060	Androgen receptor.	Regulatory associated protein of MTOR, complex 1.	0.474
LOC102776319	LOC102795905	ENSNBRP00000019409	ENSNBRP00000025696	Androgen receptor.	Uncharacterized protein.	0.845
LOC102781713	LOC102783051	ENSNBRP00000020612	ENSNBRP00000007947	Splicing factor 3b, subunit 1.	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	0.959
LOC102781713	LOC102788212	ENSNBRP00000020612	ENSNBRP00000028387	Splicing factor 3b, subunit 1.	Uncharacterized protein.	0.786
LOC102781713	LOC102796730	ENSNBRP00000020612	ENSNBRP00000013902	Splicing factor 3b, subunit 1.	Excision repair cross-complementation group 6.	0.739
LOC102783051	LOC102781713	ENSNBRP00000007947	ENSNBRP00000020612	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	Splicing factor 3b, subunit 1.	0.959
LOC102783051	LOC102788212	ENSNBRP00000007947	ENSNBRP00000028387	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	Uncharacterized protein.	0.649
LOC102783051	LOC102796730	ENSNBRP00000007947	ENSNBRP00000013902	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	Excision repair cross-complementation group 6.	0.809
LOC102788212	LOC102781713	ENSNBRP00000028387	ENSNBRP00000020612	Uncharacterized protein.	Splicing factor 3b, subunit 1.	0.786
LOC102788212	LOC102783051	ENSNBRP00000028387	ENSNBRP00000007947	Uncharacterized protein.	DEAD (Asp-Glu-Ala-Asp) box helicase 21.	0.649
LOC102788212	LOC102796730	ENSNBRP00000028387	ENSNBRP00000013902	Uncharacterized protein.	Excision repair cross-complementation group 6.	0.831
LOC102795791	ENSNBRP00000026510	ENSNBRP00000023060	ENSNBRP00000026510	Regulatory associated protein of MTOR, complex 1.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.999
LOC102795791	LOC102776319	ENSNBRP00000023060	ENSNBRP00000019409	Regulatory associated protein of MTOR, complex 1.	Androgen receptor.	0.474
LOC102795791	LOC102795905	ENSNBRP00000023060	ENSNBRP00000025696	Regulatory associated protein of MTOR, complex 1.	Uncharacterized protein.	0.474
LOC102795905	ENSNBRP00000026510	ENSNBRP00000025696	ENSNBRP00000026510	Uncharacterized protein.	Serine/threonine-protein kinase TOR; Belongs to the PI3/PI4-kinase family.	0.510
LOC102795905	LOC102776319	ENSNBRP00000025696	ENSNBRP00000019409	Uncharacterized protein.	Androgen receptor.	0.845