(6 nodes) Thyroid hormone binding network (Neolamprologus brichardi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102792861	Cathepsin H; Belongs to the peptidase C1 family. (324 aa)
	CTSH	Uncharacterized protein; Belongs to the peptidase C1 family. (307 aa)
	LOC102787326	Thyroid hormone receptor beta. (505 aa)
	LOC102790037	Uncharacterized protein. (449 aa)
	LOC102788940	Crystallin, mu. (345 aa)
	ENSNBRP00000030559	Uncharacterized protein. (402 aa)

Your Current Organism:

Neolamprologus brichardi

NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNBRP00000030559	LOC102787326	ENSNBRP00000030559	ENSNBRP00000009919	Uncharacterized protein.	Thyroid hormone receptor beta.	0.844
ENSNBRP00000030559	LOC102790037	ENSNBRP00000030559	ENSNBRP00000018979	Uncharacterized protein.	Uncharacterized protein.	0.817
LOC102787326	ENSNBRP00000030559	ENSNBRP00000009919	ENSNBRP00000030559	Thyroid hormone receptor beta.	Uncharacterized protein.	0.844
LOC102787326	LOC102790037	ENSNBRP00000009919	ENSNBRP00000018979	Thyroid hormone receptor beta.	Uncharacterized protein.	0.842
LOC102790037	ENSNBRP00000030559	ENSNBRP00000018979	ENSNBRP00000030559	Uncharacterized protein.	Uncharacterized protein.	0.817
LOC102790037	LOC102787326	ENSNBRP00000018979	ENSNBRP00000009919	Uncharacterized protein.	Thyroid hormone receptor beta.	0.842