13 items (Neolamprologus brichardi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102782399	Blood vessel epicardial substance. (361 aa)
	ENSNBRP00000001997	Cytochrome P450, family 1, subfamily C, polypeptide 1; Belongs to the cytochrome P450 family. (525 aa)
	LOC102797472	Vinculin a. (1126 aa)
	LOC102788180	Claudin; Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity; Belongs to the claudin family. (213 aa)
	LOC102792308	Pleckstrin homology domain containing, family A member 7b. (1054 aa)
	LOC102793143	Catenin (cadherin-associated protein), alpha 2. (905 aa)
	SRF	Serum response factor. (625 aa)
	LOC102794795	Vinculin b. (1066 aa)
	LOC102798872	Catenin (cadherin-associated protein), alpha 1. (907 aa)
	ENSNBRP00000023592	Cytochrome P450, family 1, subfamily B, polypeptide 1; Belongs to the cytochrome P450 family. (530 aa)
	SRF-2	Serum response factor. (256 aa)
	LOC102791181	Tyrosine kinase with immunoglobulin-like and EGF-like domains 1. (1141 aa)
	CCN3	Cellular communication network factor 3. (360 aa)

Your Current Organism:

Neolamprologus brichardi

NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102793143	LOC102794795	ENSNBRP00000018750	ENSNBRP00000020556	Catenin (cadherin-associated protein), alpha 2.	Vinculin b.	0.976
LOC102793143	LOC102797472	ENSNBRP00000018750	ENSNBRP00000014986	Catenin (cadherin-associated protein), alpha 2.	Vinculin a.	0.972
LOC102793143	LOC102798872	ENSNBRP00000018750	ENSNBRP00000020811	Catenin (cadherin-associated protein), alpha 2.	Catenin (cadherin-associated protein), alpha 1.	0.841
LOC102794795	LOC102793143	ENSNBRP00000020556	ENSNBRP00000018750	Vinculin b.	Catenin (cadherin-associated protein), alpha 2.	0.976
LOC102794795	LOC102797472	ENSNBRP00000020556	ENSNBRP00000014986	Vinculin b.	Vinculin a.	0.814
LOC102794795	LOC102798872	ENSNBRP00000020556	ENSNBRP00000020811	Vinculin b.	Catenin (cadherin-associated protein), alpha 1.	0.976
LOC102797472	LOC102793143	ENSNBRP00000014986	ENSNBRP00000018750	Vinculin a.	Catenin (cadherin-associated protein), alpha 2.	0.972
LOC102797472	LOC102794795	ENSNBRP00000014986	ENSNBRP00000020556	Vinculin a.	Vinculin b.	0.814
LOC102797472	LOC102798872	ENSNBRP00000014986	ENSNBRP00000020811	Vinculin a.	Catenin (cadherin-associated protein), alpha 1.	0.972
LOC102798872	LOC102793143	ENSNBRP00000020811	ENSNBRP00000018750	Catenin (cadherin-associated protein), alpha 1.	Catenin (cadherin-associated protein), alpha 2.	0.841
LOC102798872	LOC102794795	ENSNBRP00000020811	ENSNBRP00000020556	Catenin (cadherin-associated protein), alpha 1.	Vinculin b.	0.976
LOC102798872	LOC102797472	ENSNBRP00000020811	ENSNBRP00000014986	Catenin (cadherin-associated protein), alpha 1.	Vinculin a.	0.972