12 items (Neolamprologus brichardi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102783638	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1685 aa)
	LOC102788418	Polymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
	LOC102788568	CD3e molecule, epsilon associated protein. (345 aa)
	LOC102793248	RNA polymerase I subunit E. (420 aa)
	LOC102781675	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1134 aa)
	LOC102787536	RNA polymerase I and III subunit C. (351 aa)
	LOC102785194	TWIST neighbor. (374 aa)
	LOC102782584	RNA polymerase I and III subunit D. (114 aa)
	LOC102791864	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (128 aa)
	LOC102791705	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
	LOC102786351	Polymerase (DNA directed) iota. (713 aa)
	POLR2E	RNA polymerase II subunit E. (183 aa)

Your Current Organism:

Neolamprologus brichardi

NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
LOC102781675	LOC102782584	ENSNBRP00000023512	ENSNBRP00000026610	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase I and III subunit D.	0.999
LOC102781675	LOC102783638	ENSNBRP00000023512	ENSNBRP00000000544	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
LOC102781675	LOC102785194	ENSNBRP00000023512	ENSNBRP00000011091	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	TWIST neighbor.	0.999
LOC102781675	LOC102786351	ENSNBRP00000023512	ENSNBRP00000030470	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Polymerase (DNA directed) iota.	0.596
LOC102781675	LOC102787536	ENSNBRP00000023512	ENSNBRP00000024518	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase I and III subunit C.	0.999
LOC102781675	LOC102788418	ENSNBRP00000023512	ENSNBRP00000017536	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	Polymerase (RNA) II (DNA directed) polypeptide K.	0.999
LOC102781675	LOC102788568	ENSNBRP00000023512	ENSNBRP00000021857	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	CD3e molecule, epsilon associated protein.	0.999
LOC102781675	LOC102791705	ENSNBRP00000023512	ENSNBRP00000001383	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
LOC102781675	LOC102791864	ENSNBRP00000023512	ENSNBRP00000001433	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999
LOC102781675	LOC102793248	ENSNBRP00000023512	ENSNBRP00000021920	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase I subunit E.	0.999
LOC102781675	POLR2E	ENSNBRP00000023512	ENSNBRP00000029926	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	RNA polymerase II subunit E.	0.999
LOC102782584	LOC102781675	ENSNBRP00000026610	ENSNBRP00000023512	RNA polymerase I and III subunit D.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
LOC102782584	LOC102783638	ENSNBRP00000026610	ENSNBRP00000000544	RNA polymerase I and III subunit D.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
LOC102782584	LOC102785194	ENSNBRP00000026610	ENSNBRP00000011091	RNA polymerase I and III subunit D.	TWIST neighbor.	0.999
LOC102782584	LOC102786351	ENSNBRP00000026610	ENSNBRP00000030470	RNA polymerase I and III subunit D.	Polymerase (DNA directed) iota.	0.465
LOC102782584	LOC102787536	ENSNBRP00000026610	ENSNBRP00000024518	RNA polymerase I and III subunit D.	RNA polymerase I and III subunit C.	0.999
LOC102782584	LOC102788418	ENSNBRP00000026610	ENSNBRP00000017536	RNA polymerase I and III subunit D.	Polymerase (RNA) II (DNA directed) polypeptide K.	0.999
LOC102782584	LOC102788568	ENSNBRP00000026610	ENSNBRP00000021857	RNA polymerase I and III subunit D.	CD3e molecule, epsilon associated protein.	0.999
LOC102782584	LOC102791705	ENSNBRP00000026610	ENSNBRP00000001383	RNA polymerase I and III subunit D.	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.	0.999
LOC102782584	LOC102791864	ENSNBRP00000026610	ENSNBRP00000001433	RNA polymerase I and III subunit D.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.999