STRINGSTRING
ENSNBRP00000000331 ENSNBRP00000000331 LOC102793363 LOC102793363 LOC102783170 LOC102783170 LOC102786351 LOC102786351 LOC102786294 LOC102786294 LOC102791440 LOC102791440 ENSNBRP00000029958 ENSNBRP00000029958 POLR2E POLR2E LOC102787523 LOC102787523 TAF4 TAF4 ENSNBRP00000028906 ENSNBRP00000028906 LOC102783881 LOC102783881 LOC102790690 LOC102790690 LOC102798306 LOC102798306 LOC102782291 LOC102782291 LOC102782584 LOC102782584 LOC102786318 LOC102786318 LOC102786498 LOC102786498 LOC102785915 LOC102785915 LOC102790825 LOC102790825 LOC102777369 LOC102777369 LOC102787536 LOC102787536 LOC102799628 LOC102799628 ENSNBRP00000024306 ENSNBRP00000024306 LOC102781675 LOC102781675 LOC102796116 LOC102796116 LOC102800054 LOC102800054 LOC102793248 LOC102793248 LOC102788568 LOC102788568 ENSNBRP00000019510 ENSNBRP00000019510 LOC102784181 LOC102784181 LOC102776866 LOC102776866 LOC102788418 LOC102788418 LOC102788170 LOC102788170 LOC102796473 LOC102796473 LOC102779180 LOC102779180 LOC102786406 LOC102786406 LOC102782766 LOC102782766 LOC102781735 LOC102781735 ENSNBRP00000012914 ENSNBRP00000012914 LOC102783059 LOC102783059 LOC102794493 LOC102794493 LOC102792666 LOC102792666 ENSNBRP00000011610 ENSNBRP00000011610 ENSNBRP00000011303 ENSNBRP00000011303 LOC102785194 LOC102785194 ENSNBRP00000010673 ENSNBRP00000010673 LOC102776387 LOC102776387 ENSNBRP00000008466 ENSNBRP00000008466 LOC102779774 LOC102779774 LOC102792603 LOC102792603 LOC102796635 LOC102796635 LOC102791497 LOC102791497 LOC102794551 LOC102794551 LOC102798737 LOC102798737 ENSNBRP00000005572 ENSNBRP00000005572 LOC102799546 LOC102799546 LOC102777330 LOC102777330 ENSNBRP00000005180 ENSNBRP00000005180 LOC102784961 LOC102784961 LOC102781317 LOC102781317 LOC102793222 LOC102793222 ENSNBRP00000004320 ENSNBRP00000004320 LOC102783829 LOC102783829 LOC102782116 LOC102782116 LOC102785722 LOC102785722 LOC102776076 LOC102776076 LOC102776314 LOC102776314 LOC102797058 LOC102797058 ENSNBRP00000002642 ENSNBRP00000002642 LOC102790493 LOC102790493 LOC102788242 LOC102788242 LOC102793717 LOC102793717 LOC102775976 LOC102775976 LOC102779365 LOC102779365 LOC102792151 LOC102792151 LOC102793541 LOC102793541 LOC102791558 LOC102791558 LOC102791864 LOC102791864 LOC102791705 LOC102791705 ENSNBRP00000001204 ENSNBRP00000001204 LOC102785323 LOC102785323 LOC102783638 LOC102783638
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ENSNBRP00000000331Uncharacterized protein. (94 aa)
LOC102793363LEO1 homolog, Paf1/RNA polymerase II complex component. (632 aa)
LOC102783170TAF3 RNA polymerase II, TATA box binding protein (TBP)-associated facto. (935 aa)
LOC102786351Polymerase (DNA directed) iota. (713 aa)
LOC102786294Zgc:171971. (343 aa)
LOC102791440DNA primase; Belongs to the eukaryotic-type primase small subunit family. (397 aa)
ENSNBRP00000029958Uncharacterized protein. (133 aa)
POLR2ERNA polymerase II subunit E. (183 aa)
LOC102787523TAF4A RNA polymerase II, TATA box binding protein (TBP)-associated factor. (569 aa)
TAF4TATA-box binding protein associated factor 4. (894 aa)
ENSNBRP00000028906Uncharacterized protein. (214 aa)
LOC102783881TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (742 aa)
LOC102790690PAF1 homolog, Paf1/RNA polymerase II complex component. (509 aa)
LOC102798306DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (316 aa)
LOC102782291TATA-box binding protein associated factor 13. (124 aa)
LOC102782584RNA polymerase I and III subunit D. (114 aa)
LOC102786318Polymerase (RNA) III (DNA directed) polypeptide D. (391 aa)
LOC102786498General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (253 aa)
LOC102785915Excision repair cross-complementation group 3. (783 aa)
LOC102790825WD repeat domain 47a. (875 aa)
LOC102777369General transcription factor IIH, polypeptide 5. (71 aa)
LOC102787536RNA polymerase I and III subunit C. (351 aa)
LOC102799628Transcription initiation factor TFIID subunit. (1823 aa)
ENSNBRP00000024306General transcription factor IIA, 1. (319 aa)
LOC102781675DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1134 aa)
LOC102796116WD repeat domain 61. (305 aa)
LOC102800054Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (286 aa)
LOC102793248RNA polymerase I subunit E. (420 aa)
LOC102788568CD3e molecule, epsilon associated protein. (345 aa)
ENSNBRP00000019510Uncharacterized protein. (61 aa)
LOC102784181DNA primase large subunit; Regulatory subunit of the DNA primase complex and component of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which play an essential role in the initiation of DNA synthesis. The primase subunit of the polymerase alpha complex initiates DNA synthesis by oligomerising short RNA primers on both leading and lagging strands. (499 aa)
LOC102776866General transcription factor IIH, polypeptide 1. (501 aa)
LOC102788418Polymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
LOC102788170General transcription factor IIH subunit. (392 aa)
LOC102796473TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (204 aa)
LOC102779180General transcription factor IIE, polypeptide 1, alpha. (330 aa)
LOC102786406TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (1136 aa)
LOC102782766CTR9 homolog, Paf1/RNA polymerase II complex component. (1150 aa)
LOC102781735Regulation of nuclear pre-mRNA domain containing 1A. (294 aa)
ENSNBRP00000012914RNA polymerase II subunit M. (357 aa)
LOC102783059Cyclin-dependent kinase 20. (323 aa)
LOC102794493CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (311 aa)
LOC102792666General transcription factor IIH, polypeptide 3. (300 aa)
ENSNBRP00000011610Uncharacterized protein. (296 aa)
ENSNBRP00000011303Uncharacterized protein. (206 aa)
LOC102785194TWIST neighbor. (374 aa)
ENSNBRP00000010673TAF4 domain-containing protein. (318 aa)
LOC102776387Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (503 aa)
ENSNBRP00000008466Polymerase (RNA) II (DNA directed) polypeptide J. (128 aa)
LOC102779774Cyclin-dependent kinase 2 interacting protein. (210 aa)
LOC102792603SH3-binding domain protein 5-like, a. (432 aa)
LOC102796635Cell division cycle 73, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae). (438 aa)
LOC102791497Si:dkey-219c3.2. (904 aa)
LOC102794551General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (256 aa)
LOC102798737Peroxisomal biogenesis factor 2. (330 aa)
ENSNBRP00000005572Protein kinase domain-containing protein. (311 aa)
LOC102799546TATA box binding protein. (251 aa)
LOC102777330TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (597 aa)
ENSNBRP00000005180Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (123 aa)
LOC102784961Polymerase (RNA) II (DNA directed) polypeptide G-like. (162 aa)
LOC102781317Cyclin-dependent kinase 7. (306 aa)
LOC102793222RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (547 aa)
ENSNBRP00000004320CID domain-containing protein. (262 aa)
LOC102783829DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis. (596 aa)
LOC102782116RNA polymerase II associated protein 2. (297 aa)
LOC102785722RTF1 homolog, Paf1/RNA polymerase II complex component. (655 aa)
LOC102776076Regulation of nuclear pre-mRNA domain containing 1B. (328 aa)
LOC102776314Polymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
LOC102797058WD_REPEATS_REGION domain-containing protein. (660 aa)
ENSNBRP00000002642Uncharacterized protein. (155 aa)
LOC102790493DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1928 aa)
LOC102788242DNA polymerase. (1397 aa)
LOC102793717Cyclin H; Belongs to the cyclin family. (331 aa)
LOC102775976RecQ helicase-like 5. (934 aa)
LOC102779365TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (314 aa)
LOC102792151General transcription factor IIH, polypeptide 4. (451 aa)
LOC102793541General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (428 aa)
LOC102791558DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
LOC102791864DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (128 aa)
LOC102791705DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
ENSNBRP00000001204Uncharacterized protein. (50 aa)
LOC102785323DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
LOC102783638DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1685 aa)
Your Current Organism:
Neolamprologus brichardi
NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid
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