(28 nodes) ATP-dependent RNA helicase DEAD-box, conserved site network (Neolamprologus brichardi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102789127	DEAD (Asp-Glu-Ala-Asp) box helicase 5; Belongs to the DEAD box helicase family. (577 aa)
	LOC102800186	DEAD (Asp-Glu-Ala-Asp) box polypeptide 51; Belongs to the DEAD box helicase family. (621 aa)
	LOC102788576	DEAD (Asp-Glu-Ala-Asp) box polypeptide 43; Belongs to the DEAD box helicase family. (679 aa)
	LOC102797024	DEAD (Asp-Glu-Ala-Asp) box polypeptide 46. (1169 aa)
	LOC102783565	DEAD (Asp-Glu-Ala-Asp) box helicase 24. (870 aa)
	ENSNBRP00000007990	DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family. (406 aa)
	ENSNBRP00000007230	ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily. (777 aa)
	LOC102777021	DEAD (Asp-Glu-Ala-Asp) box helicase 42. (895 aa)
	LOC102797036	Eukaryotic translation initiation factor 4A, isoform 2; Belongs to the DEAD box helicase family. (411 aa)
	ENSNBRP00000004425	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family. (441 aa)
	ENSNBRP00000004279	Uncharacterized protein. (243 aa)
	DDX17	DEAD-box helicase 17; Belongs to the DEAD box helicase family. (436 aa)
	LOC102790298	DEAD (Asp-Glu-Ala-Asp) box polypeptide 47; Belongs to the DEAD box helicase family. (476 aa)
	LOC102793780	Centrin 4. (171 aa)
	LOC102780255	Centrin, EF-hand protein, 2. (165 aa)
	LOC102776245	DEAD-box helicase 3 X-linked a; Belongs to the DEAD box helicase family. (707 aa)
	LOC102777146	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family. (780 aa)
	LOC102799025	Uncharacterized protein; Belongs to the DEAD box helicase family. (424 aa)
	LOC102778855	Uncharacterized protein; Belongs to the DEAD box helicase family. (697 aa)
	LOC102799472	RNA helicase. (590 aa)
	LOC102796765	RNA helicase. (848 aa)
	LOC102800138	DEAD (Asp-Glu-Ala-Asp) box helicase 61; Belongs to the DEAD box helicase family. (444 aa)
	LOC102790283	Uncharacterized protein; Belongs to the DEAD box helicase family. (453 aa)
	LOC102796810	DEAD (Asp-Glu-Ala-Asp) box polypeptide 4; Belongs to the DEAD box helicase family. (609 aa)
	LOC102778005	RNA helicase. (604 aa)
	LOC102792000	DEAD (Asp-Glu-Ala-Asp) box polypeptide 23. (834 aa)
	LOC102784220	DEAD (Asp-Glu-Ala-Asp) box polypeptide 49; Belongs to the DEAD box helicase family. (477 aa)
	LOC102776738	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family. (406 aa)

Your Current Organism:

Neolamprologus brichardi

NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DDX17	ENSNBRP00000004425	ENSNBRP00000003266	ENSNBRP00000004425	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	0.404
DDX17	ENSNBRP00000007230	ENSNBRP00000003266	ENSNBRP00000007230	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	ATP-dependent RNA helicase; Belongs to the DEAD box helicase family. DDX54/DBP10 subfamily.	0.651
DDX17	ENSNBRP00000007990	ENSNBRP00000003266	ENSNBRP00000007990	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 27; Belongs to the DEAD box helicase family.	0.758
DDX17	LOC102776245	ENSNBRP00000003266	ENSNBRP00000026753	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	DEAD-box helicase 3 X-linked a; Belongs to the DEAD box helicase family.	0.637
DDX17	LOC102776738	ENSNBRP00000003266	ENSNBRP00000028466	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	0.841
DDX17	LOC102777021	ENSNBRP00000003266	ENSNBRP00000005694	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	DEAD (Asp-Glu-Ala-Asp) box helicase 42.	0.570
DDX17	LOC102778005	ENSNBRP00000003266	ENSNBRP00000032040	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	RNA helicase.	0.693
DDX17	LOC102778855	ENSNBRP00000003266	ENSNBRP00000025689	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.636
DDX17	LOC102783565	ENSNBRP00000003266	ENSNBRP00000009330	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	DEAD (Asp-Glu-Ala-Asp) box helicase 24.	0.764
DDX17	LOC102784220	ENSNBRP00000003266	ENSNBRP00000028919	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 49; Belongs to the DEAD box helicase family.	0.471
DDX17	LOC102790298	ENSNBRP00000003266	ENSNBRP00000001743	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 47; Belongs to the DEAD box helicase family.	0.526
DDX17	LOC102796765	ENSNBRP00000003266	ENSNBRP00000021747	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	RNA helicase.	0.630
DDX17	LOC102796810	ENSNBRP00000003266	ENSNBRP00000019104	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 4; Belongs to the DEAD box helicase family.	0.647
DDX17	LOC102799472	ENSNBRP00000003266	ENSNBRP00000024548	DEAD-box helicase 17; Belongs to the DEAD box helicase family.	RNA helicase.	0.526
ENSNBRP00000004279	ENSNBRP00000004425	ENSNBRP00000004279	ENSNBRP00000004425	Uncharacterized protein.	DEAD (Asp-Glu-Ala-Asp) box helicase 6; Belongs to the DEAD box helicase family.	0.418
ENSNBRP00000004279	LOC102776245	ENSNBRP00000004279	ENSNBRP00000026753	Uncharacterized protein.	DEAD-box helicase 3 X-linked a; Belongs to the DEAD box helicase family.	0.640
ENSNBRP00000004279	LOC102776738	ENSNBRP00000004279	ENSNBRP00000028466	Uncharacterized protein.	Eukaryotic translation initiation factor 4A3; Belongs to the DEAD box helicase family.	0.953
ENSNBRP00000004279	LOC102777146	ENSNBRP00000004279	ENSNBRP00000026489	Uncharacterized protein.	DEAD (Asp-Glu-Ala-Asp) box polypeptide 20; Belongs to the DEAD box helicase family.	0.637
ENSNBRP00000004279	LOC102778855	ENSNBRP00000004279	ENSNBRP00000025689	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.638
ENSNBRP00000004279	LOC102790283	ENSNBRP00000004279	ENSNBRP00000019581	Uncharacterized protein.	Uncharacterized protein; Belongs to the DEAD box helicase family.	0.453