(69 nodes) F-box domain network (Neolamprologus brichardi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102800092	F-box protein 33. (492 aa)
	LOC102787464	F-box protein 32. (358 aa)
	LOC102780984	Uncharacterized protein. (273 aa)
	LOC102779532	F-box and leucine-rich repeat protein 2. (432 aa)
	LOC102790376	Uncharacterized protein. (883 aa)
	LOC102777085	Si:dkey-192l18.9. (443 aa)
	LOC102793713	F-box protein 5. (384 aa)
	LOC102779701	F-box protein 45. (289 aa)
	LOC102778533	F-box protein 9. (424 aa)
	LOC102788282	F-box and leucine-rich repeat protein 3, like. (426 aa)
	LOC102777631	F-box protein 41. (825 aa)
	ENSNBRP00000017740	F-box and leucine-rich repeat protein 15. (297 aa)
	LOC102783635	F-box and WD repeat domain containing 8. (489 aa)
	LOC102797634	F-box protein 4. (355 aa)
	ENSNBRP00000018389	F-box domain-containing protein. (398 aa)
	LOC102776382	F-box and leucine-rich repeat protein 17. (448 aa)
	LOC102797763	Uncharacterized protein. (842 aa)
	LOC102791803	F-box and leucine-rich repeat protein 6. (525 aa)
	LOC102790392	F-box protein 30b. (720 aa)
	LOC102794212	F-box protein 10. (952 aa)
	ENSNBRP00000022041	Lysine (K)-specific demethylase 2Ba. (431 aa)
	ENSNBRP00000022211	F-box domain-containing protein. (446 aa)
	LOC102799357	F-box protein 7. (488 aa)
	LOC102777541	F-box and leucine-rich repeat protein 22. (228 aa)
	LOC102780320	Leucine rich repeat containing 29. (580 aa)
	ENSNBRP00000023771	F-box protein 16. (225 aa)
	LOC102782496	F-box DNA helicase 1. (986 aa)
	LOC102781202	F-box domain-containing protein. (434 aa)
	ENSNBRP00000024563	F-box protein 28. (169 aa)
	LOC102781812	Zgc:158376. (836 aa)
	LOC102790187	F-box and leucine-rich repeat protein 20. (422 aa)
	LOC102794753	F-box domain-containing protein. (153 aa)
	LOC102776502	Si:ch73-142c19.1. (474 aa)
	LOC102781397	F-box protein 3. (416 aa)
	LOC102793814	Si:dkey-12e7.1. (372 aa)
	LOC102784218	F-box domain-containing protein. (456 aa)
	LOC102775902	Cyclin F; Belongs to the cyclin family. (775 aa)
	LOC102781423	Uncharacterized protein. (524 aa)
	LOC102780497	F-box and leucine-rich repeat protein 14a. (408 aa)
	LOC102782810	Si:ch73-290k24.5. (693 aa)
	LOC102794320	F-box and leucine-rich repeat protein 3a. (437 aa)
	LOC102793471	F-box and WD repeat domain containing 2. (454 aa)
	LOC102777231	Uncharacterized protein. (695 aa)
	LOC102776937	Uncharacterized protein. (718 aa)
	LOC102779063	Lysine (K)-specific demethylase 2Bb. (1257 aa)
	ENSNBRP00000003614	F-box domain-containing protein. (510 aa)
	FBXO40	F-box protein 40. (682 aa)
	LOC102786685	F-box protein 36a. (189 aa)
	ENSNBRP00000004574	F-box protein 36b. (290 aa)
	FBXL14	F-box and leucine rich repeat protein 14. (402 aa)
	LOC102792207	Lysine (K)-specific demethylase 2Ab. (1071 aa)
	LOC102794513	F-box protein 31. (622 aa)
	LOC102788808	F-box and leucine-rich repeat protein 5. (688 aa)
	LOC102781814	F-box protein 42. (699 aa)
	LOC102793956	F-box and WD repeat domain containing 7. (775 aa)
	LOC102794708	F-box and WD repeat domain containing 9. (571 aa)
	LOC102783705	S-phase kinase-associated protein 2, E3 ubiquitin protein ligase. (417 aa)
	LOC102784528	F-box and WD repeat domain containing 5. (609 aa)
	ENSNBRP00000008550	F-box protein 34. (611 aa)
	LOC102780792	F-box and leucine-rich repeat protein 4. (612 aa)
	hagoromo	F-box and WD repeat domain containing 4. (363 aa)
	LOC102788650	F-box protein 30a. (738 aa)
	LOC102799157	F-box domain-containing protein. (447 aa)
	LOC102783924	F-box and WD repeat domain containing 11b. (527 aa)
	LOC102798449	F-box and leucine-rich repeat protein 18. (721 aa)
	LOC102798721	F-box protein 4. (276 aa)
	LOC102780061	F-box protein 22. (385 aa)
	LOC102781567	F-box domain-containing protein. (427 aa)
	LOC102786997	F-box protein 46. (765 aa)

Your Current Organism:

Neolamprologus brichardi

NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNBRP00000003614	ENSNBRP00000008550	ENSNBRP00000003614	ENSNBRP00000008550	F-box domain-containing protein.	F-box protein 34.	0.453
ENSNBRP00000003614	LOC102781814	ENSNBRP00000003614	ENSNBRP00000007412	F-box domain-containing protein.	F-box protein 42.	0.430
ENSNBRP00000003614	LOC102783924	ENSNBRP00000003614	ENSNBRP00000011401	F-box domain-containing protein.	F-box and WD repeat domain containing 11b.	0.934
ENSNBRP00000003614	LOC102786997	ENSNBRP00000003614	ENSNBRP00000002029	F-box domain-containing protein.	F-box protein 46.	0.424
ENSNBRP00000003614	LOC102794513	ENSNBRP00000003614	ENSNBRP00000005785	F-box domain-containing protein.	F-box protein 31.	0.567
ENSNBRP00000004574	LOC102778533	ENSNBRP00000004574	ENSNBRP00000015744	F-box protein 36b.	F-box protein 9.	0.402
ENSNBRP00000004574	LOC102787464	ENSNBRP00000004574	ENSNBRP00000013587	F-box protein 36b.	F-box protein 32.	0.455
ENSNBRP00000008550	ENSNBRP00000003614	ENSNBRP00000008550	ENSNBRP00000003614	F-box protein 34.	F-box domain-containing protein.	0.453
ENSNBRP00000008550	LOC102776937	ENSNBRP00000008550	ENSNBRP00000003063	F-box protein 34.	Uncharacterized protein.	0.495
ENSNBRP00000008550	LOC102777231	ENSNBRP00000008550	ENSNBRP00000003051	F-box protein 34.	Uncharacterized protein.	0.495
ENSNBRP00000008550	LOC102794513	ENSNBRP00000008550	ENSNBRP00000005785	F-box protein 34.	F-box protein 31.	0.452
ENSNBRP00000017740	LOC102778533	ENSNBRP00000017740	ENSNBRP00000015744	F-box and leucine-rich repeat protein 15.	F-box protein 9.	0.429
ENSNBRP00000017740	LOC102779701	ENSNBRP00000017740	ENSNBRP00000015477	F-box and leucine-rich repeat protein 15.	F-box protein 45.	0.640
ENSNBRP00000017740	LOC102781397	ENSNBRP00000017740	ENSNBRP00000028940	F-box and leucine-rich repeat protein 15.	F-box protein 3.	0.535
ENSNBRP00000017740	LOC102781423	ENSNBRP00000017740	ENSNBRP00000002548	F-box and leucine-rich repeat protein 15.	Uncharacterized protein.	0.556
ENSNBRP00000017740	LOC102783705	ENSNBRP00000017740	ENSNBRP00000008128	F-box and leucine-rich repeat protein 15.	S-phase kinase-associated protein 2, E3 ubiquitin protein ligase.	0.698
ENSNBRP00000017740	LOC102783924	ENSNBRP00000017740	ENSNBRP00000011401	F-box and leucine-rich repeat protein 15.	F-box and WD repeat domain containing 11b.	0.683
ENSNBRP00000017740	LOC102787464	ENSNBRP00000017740	ENSNBRP00000013587	F-box and leucine-rich repeat protein 15.	F-box protein 32.	0.457
ENSNBRP00000017740	LOC102790376	ENSNBRP00000017740	ENSNBRP00000014589	F-box and leucine-rich repeat protein 15.	Uncharacterized protein.	0.432
ENSNBRP00000017740	LOC102793471	ENSNBRP00000017740	ENSNBRP00000002969	F-box and leucine-rich repeat protein 15.	F-box and WD repeat domain containing 2.	0.632