(9 nodes) Clathrin adaptor, alpha/beta/gamma-adaptin, appendage, Ig-like subdomain network (Neolamprologus brichardi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102791921	Uncharacterized protein. (598 aa)
	LOC102789965	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a. (724 aa)
	LOC102784539	Golgi associated, gamma adaptin ear containing, ARF binding protein 3b. (680 aa)
	LOC102786025	AP complex subunit beta. (948 aa)
	LOC102783846	AP complex subunit beta. (939 aa)
	LOC102794366	AP-1 complex subunit gamma. (820 aa)
	ENSNBRP00000023579	AP-1 complex subunit gamma. (752 aa)
	GGA1	Golgi associated, gamma adaptin ear containing, ARF binding protein 1. (622 aa)
	LOC102777093	Golgi-associated, gamma adaptin ear containing, ARF binding protein 1. (595 aa)

Your Current Organism:

Neolamprologus brichardi

NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNBRP00000023579	LOC102783846	ENSNBRP00000023579	ENSNBRP00000013531	AP-1 complex subunit gamma.	AP complex subunit beta.	0.992
ENSNBRP00000023579	LOC102784539	ENSNBRP00000023579	ENSNBRP00000006566	AP-1 complex subunit gamma.	Golgi associated, gamma adaptin ear containing, ARF binding protein 3b.	0.545
ENSNBRP00000023579	LOC102786025	ENSNBRP00000023579	ENSNBRP00000012134	AP-1 complex subunit gamma.	AP complex subunit beta.	0.992
ENSNBRP00000023579	LOC102789965	ENSNBRP00000023579	ENSNBRP00000000737	AP-1 complex subunit gamma.	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.	0.545
ENSNBRP00000023579	LOC102794366	ENSNBRP00000023579	ENSNBRP00000013540	AP-1 complex subunit gamma.	AP-1 complex subunit gamma.	0.895
GGA1	LOC102777093	ENSNBRP00000026201	ENSNBRP00000003188	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	Golgi-associated, gamma adaptin ear containing, ARF binding protein 1.	0.816
GGA1	LOC102784539	ENSNBRP00000026201	ENSNBRP00000006566	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	Golgi associated, gamma adaptin ear containing, ARF binding protein 3b.	0.868
GGA1	LOC102789965	ENSNBRP00000026201	ENSNBRP00000000737	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.	0.869
GGA1	LOC102791921	ENSNBRP00000026201	ENSNBRP00000009602	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	Uncharacterized protein.	0.841
LOC102777093	GGA1	ENSNBRP00000003188	ENSNBRP00000026201	Golgi-associated, gamma adaptin ear containing, ARF binding protein 1.	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	0.816
LOC102777093	LOC102784539	ENSNBRP00000003188	ENSNBRP00000006566	Golgi-associated, gamma adaptin ear containing, ARF binding protein 1.	Golgi associated, gamma adaptin ear containing, ARF binding protein 3b.	0.895
LOC102777093	LOC102789965	ENSNBRP00000003188	ENSNBRP00000000737	Golgi-associated, gamma adaptin ear containing, ARF binding protein 1.	Golgi associated, gamma adaptin ear containing, ARF binding protein 3a.	0.895
LOC102777093	LOC102791921	ENSNBRP00000003188	ENSNBRP00000009602	Golgi-associated, gamma adaptin ear containing, ARF binding protein 1.	Uncharacterized protein.	0.844
LOC102783846	ENSNBRP00000023579	ENSNBRP00000013531	ENSNBRP00000023579	AP complex subunit beta.	AP-1 complex subunit gamma.	0.992
LOC102783846	LOC102794366	ENSNBRP00000013531	ENSNBRP00000013540	AP complex subunit beta.	AP-1 complex subunit gamma.	0.995
LOC102784539	ENSNBRP00000023579	ENSNBRP00000006566	ENSNBRP00000023579	Golgi associated, gamma adaptin ear containing, ARF binding protein 3b.	AP-1 complex subunit gamma.	0.545
LOC102784539	GGA1	ENSNBRP00000006566	ENSNBRP00000026201	Golgi associated, gamma adaptin ear containing, ARF binding protein 3b.	Golgi associated, gamma adaptin ear containing, ARF binding protein 1.	0.868
LOC102784539	LOC102777093	ENSNBRP00000006566	ENSNBRP00000003188	Golgi associated, gamma adaptin ear containing, ARF binding protein 3b.	Golgi-associated, gamma adaptin ear containing, ARF binding protein 1.	0.895
LOC102784539	LOC102791921	ENSNBRP00000006566	ENSNBRP00000009602	Golgi associated, gamma adaptin ear containing, ARF binding protein 3b.	Uncharacterized protein.	0.909
LOC102784539	LOC102794366	ENSNBRP00000006566	ENSNBRP00000013540	Golgi associated, gamma adaptin ear containing, ARF binding protein 3b.	AP-1 complex subunit gamma.	0.545