(5 nodes) Zinc finger, Sec23/Sec24-type superfamily network (Neolamprologus brichardi)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	ENSNBRP00000013353	SEC24 homolog C, COPII coat complex component. (646 aa)
	LOC102796029	SEC24 homolog A, COPII coat complex component. (877 aa)
	LOC102779575	SEC24 homolog B, COPII coat complex component. (983 aa)
	LOC102776814	Uncharacterized protein. (496 aa)
	LOC102779165	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily. (766 aa)

Your Current Organism:

Neolamprologus brichardi

NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNBRP00000013353	LOC102776814	ENSNBRP00000013353	ENSNBRP00000027459	SEC24 homolog C, COPII coat complex component.	Uncharacterized protein.	0.408
ENSNBRP00000013353	LOC102779165	ENSNBRP00000013353	ENSNBRP00000027935	SEC24 homolog C, COPII coat complex component.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.992
ENSNBRP00000013353	LOC102779575	ENSNBRP00000013353	ENSNBRP00000018931	SEC24 homolog C, COPII coat complex component.	SEC24 homolog B, COPII coat complex component.	0.971
ENSNBRP00000013353	LOC102796029	ENSNBRP00000013353	ENSNBRP00000010322	SEC24 homolog C, COPII coat complex component.	SEC24 homolog A, COPII coat complex component.	0.971
LOC102776814	ENSNBRP00000013353	ENSNBRP00000027459	ENSNBRP00000013353	Uncharacterized protein.	SEC24 homolog C, COPII coat complex component.	0.408
LOC102779165	ENSNBRP00000013353	ENSNBRP00000027935	ENSNBRP00000013353	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	SEC24 homolog C, COPII coat complex component.	0.992
LOC102779165	LOC102779575	ENSNBRP00000027935	ENSNBRP00000018931	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	SEC24 homolog B, COPII coat complex component.	0.983
LOC102779165	LOC102796029	ENSNBRP00000027935	ENSNBRP00000010322	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	SEC24 homolog A, COPII coat complex component.	0.983
LOC102779575	ENSNBRP00000013353	ENSNBRP00000018931	ENSNBRP00000013353	SEC24 homolog B, COPII coat complex component.	SEC24 homolog C, COPII coat complex component.	0.971
LOC102779575	LOC102779165	ENSNBRP00000018931	ENSNBRP00000027935	SEC24 homolog B, COPII coat complex component.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.983
LOC102796029	ENSNBRP00000013353	ENSNBRP00000010322	ENSNBRP00000013353	SEC24 homolog A, COPII coat complex component.	SEC24 homolog C, COPII coat complex component.	0.971
LOC102796029	LOC102779165	ENSNBRP00000010322	ENSNBRP00000027935	SEC24 homolog A, COPII coat complex component.	Protein transport protein SEC23; Component of the coat protein complex II (COPII) which promotes the formation of transport vesicles from the endoplasmic reticulum (ER). The coat has two main functions, the physical deformation of the endoplasmic reticulum membrane into vesicles and the selection of cargo molecules; Belongs to the SEC23/SEC24 family. SEC23 subfamily.	0.983