STRINGSTRING
LOC102795371 LOC102795371 LOC102792955 LOC102792955 ENSNBRP00000000634 ENSNBRP00000000634 ENSNBRP00000000719 ENSNBRP00000000719 LOC102785323 LOC102785323 LOC102791705 LOC102791705 LOC102791558 LOC102791558 LOC102795655 LOC102795655 LOC102793541 LOC102793541 LOC102777348 LOC102777348 LOC102793717 LOC102793717 LOC102790493 LOC102790493 LOC102776314 LOC102776314 LOC102791381 LOC102791381 LOC102784062 LOC102784062 LOC102783707 LOC102783707 LOC102784833 LOC102784833 LOC102781317 LOC102781317 LOC102784961 LOC102784961 LOC102778097 LOC102778097 LOC102780775 LOC102780775 LOC102788022 LOC102788022 ENSNBRP00000008466 ENSNBRP00000008466 LOC102799807 LOC102799807 LOC102784948 LOC102784948 ENSNBRP00000009106 ENSNBRP00000009106 LOC102796593 LOC102796593 LOC102789182 LOC102789182 LOC102786014 LOC102786014 LOC102792666 LOC102792666 LOC102794493 LOC102794493 LOC102778912 LOC102778912 LOC102798988 LOC102798988 LOC102796730 LOC102796730 LOC102794277 LOC102794277 ENSNBRP00000014632 ENSNBRP00000014632 ENSNBRP00000014704 ENSNBRP00000014704 ZNF830 ZNF830 LOC102793946 LOC102793946 LOC102788170 LOC102788170 LOC102791225 LOC102791225 LOC102788418 LOC102788418 LOC102776866 LOC102776866 LOC102785957 LOC102785957 ENSNBRP00000017935 ENSNBRP00000017935 LOC102800188 LOC102800188 LOC102797007 LOC102797007 LOC102780633 LOC102780633 LOC102777369 LOC102777369 LOC102785915 LOC102785915 LOC102779364 LOC102779364 LOC102783640 LOC102783640 ENSNBRP00000026259 ENSNBRP00000026259 LOC102779960 LOC102779960 LOC102783470 LOC102783470 LOC102778228 LOC102778228 POLR2E POLR2E ENSNBRP00000029958 ENSNBRP00000029958 ENSNBRP00000030971 ENSNBRP00000030971 LOC102795280 LOC102795280 LOC102790968 LOC102790968 TCEANC TCEANC COPS6 COPS6
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102795371Transcription elongation factor A (SII), 1. (325 aa)
LOC102792955Pre-mRNA processing factor 19. (505 aa)
ENSNBRP00000000634Ubiquitin A-52 residue ribosomal protein fusion product 1. (102 aa)
ENSNBRP00000000719Transcription elongation factor A (SII), 3. (298 aa)
LOC102785323DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
LOC102791705DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
LOC102791558DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
LOC102795655Ubiquitin-like domain-containing protein. (149 aa)
LOC102793541General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (428 aa)
LOC102777348Ubiquitin-like domain-containing protein. (126 aa)
LOC102793717Cyclin H; Belongs to the cyclin family. (331 aa)
LOC102790493DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1928 aa)
LOC102776314Polymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
LOC102791381Si:ch73-1a9.3. (82 aa)
LOC102784062KxDL motif containing 1. (184 aa)
LOC102783707E1A binding protein p300 b. (2608 aa)
LOC102784833Ring-box 1, E3 ubiquitin protein ligase. (107 aa)
LOC102781317Cyclin-dependent kinase 7. (306 aa)
LOC102784961Polymerase (RNA) II (DNA directed) polypeptide G-like. (162 aa)
LOC102778097Polymerase (RNA) II (DNA directed) polypeptide C. (204 aa)
LOC102780775Xeroderma pigmentosum, complementation group A. (271 aa)
LOC102788022E1A binding protein p300 a. (2460 aa)
ENSNBRP00000008466Polymerase (RNA) II (DNA directed) polypeptide J. (128 aa)
LOC102799807Ubiquitin specific peptidase 7 (herpes virus-associated); Belongs to the peptidase C19 family. (1003 aa)
LOC102784948ISY1 splicing factor homolog. (239 aa)
ENSNBRP00000009106Uncharacterized protein. (63 aa)
LOC102796593XPA binding protein 2. (820 aa)
LOC102789182Transcription elongation factor A (SII), 2. (284 aa)
LOC102786014G protein pathway suppressor 1. (487 aa)
LOC102792666General transcription factor IIH, polypeptide 3. (300 aa)
LOC102794493CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (311 aa)
LOC102778912NRDE-2, necessary for RNA interference, domain containing. (1090 aa)
LOC102798988Ribosomal protein S27a. (156 aa)
LOC102796730Excision repair cross-complementation group 6. (1412 aa)
LOC102794277COP9 signalosome subunit 8. (191 aa)
ENSNBRP00000014632Cullin domain-containing protein; Belongs to the cullin family. (160 aa)
ENSNBRP00000014704CULLIN_2 domain-containing protein; Belongs to the cullin family. (247 aa)
ZNF830Zinc finger protein 830. (348 aa)
LOC102793946Uncharacterized protein. (207 aa)
LOC102788170General transcription factor IIH subunit. (392 aa)
LOC102791225Excision repair cross-complementation group 8. (389 aa)
LOC102788418Polymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
LOC102776866General transcription factor IIH, polypeptide 1. (501 aa)
LOC102785957UV-stimulated scaffold protein A. (622 aa)
ENSNBRP00000017935Polymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
LOC102800188COP9 signalosome subunit 3. (387 aa)
LOC102797007Excision repair cross-complementation group 2. (623 aa)
LOC102780633Cullin 4A; Belongs to the cullin family. (763 aa)
LOC102777369General transcription factor IIH, polypeptide 5. (71 aa)
LOC102785915Excision repair cross-complementation group 3. (783 aa)
LOC102779364Damage-specific DNA binding protein 1. (1140 aa)
LOC102783640COP9 constitutive photomorphogenic homolog subunit 4 (Arabidopsis). (406 aa)
ENSNBRP00000026259High mobility group nucleosome binding domain 6. (87 aa)
LOC102779960COP9 constitutive photomorphogenic homolog subunit 7A. (268 aa)
LOC102783470Ubiquitin-like domain-containing protein. (128 aa)
LOC102778228COP9 signalosome subunit 2. (443 aa)
POLR2ERNA polymerase II subunit E. (183 aa)
ENSNBRP00000029958Uncharacterized protein. (133 aa)
ENSNBRP00000030971Protein phosphatase 1, regulatory subunit 42. (261 aa)
LOC102795280COP9 signalosome subunit 5. (334 aa)
LOC102790968Aquarius intron-binding spliceosomal factor. (1378 aa)
TCEANCTranscription elongation factor A N-terminal and central domain containing. (325 aa)
COPS6COP9 signalosome subunit 6. (316 aa)
Your Current Organism:
Neolamprologus brichardi
NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid
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