STRINGSTRING
LOC102779678 LOC102779678 LOC102794920 LOC102794920 LOC102789855 LOC102789855 LOC102786498 LOC102786498 POLR2E POLR2E PTBP2 PTBP2 NCBP1 NCBP1 ENSNBRP00000017935 ENSNBRP00000017935 LOC102788418 LOC102788418 LOC102797883 LOC102797883 LOC102784961 LOC102784961 LOC102778097 LOC102778097 LOC102794551 LOC102794551 PTBP3 PTBP3 ENSNBRP00000008466 ENSNBRP00000008466 LOC102776387 LOC102776387 LOC102791558 LOC102791558 LOC102781291 LOC102781291 LOC102789720 LOC102789720 LOC102796970 LOC102796970 LOC102790689 LOC102790689 LOC102791705 LOC102791705 LOC102785323 LOC102785323 LOC102776314 LOC102776314 LOC102790493 LOC102790493 LOC102779238 LOC102779238 LOC102782764 LOC102782764 ENSNBRP00000029958 ENSNBRP00000029958
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102779678Heterogeneous nuclear ribonucleoprotein M. (682 aa)
LOC102794920TIA1 cytotoxic granule-associated RNA binding protein-like 1. (408 aa)
LOC102789855Uncharacterized protein. (333 aa)
LOC102786498General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (253 aa)
POLR2ERNA polymerase II subunit E. (183 aa)
PTBP2Polypyrimidine tract binding protein 2a. (521 aa)
NCBP1Nuclear cap binding protein subunit 1. (620 aa)
ENSNBRP00000017935Polymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
LOC102788418Polymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
LOC102797883Uncharacterized protein. (457 aa)
LOC102784961Polymerase (RNA) II (DNA directed) polypeptide G-like. (162 aa)
LOC102778097Polymerase (RNA) II (DNA directed) polypeptide C. (204 aa)
LOC102794551General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (256 aa)
PTBP3Polypyrimidine tract binding protein 3. (487 aa)
ENSNBRP00000008466Polymerase (RNA) II (DNA directed) polypeptide J. (128 aa)
LOC102776387Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (503 aa)
LOC102791558DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
LOC102781291Polypyrimidine tract binding protein 1a. (529 aa)
LOC102789720Uncharacterized protein. (277 aa)
LOC102796970Cytotoxic granule-associated RNA binding protein 1, like. (386 aa)
LOC102790689Epithelial splicing regulatory protein 1. (719 aa)
LOC102791705DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
LOC102785323DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
LOC102776314Polymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
LOC102790493DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1928 aa)
LOC102779238Uncharacterized protein. (499 aa)
LOC102782764Epithelial splicing regulatory protein 2. (687 aa)
ENSNBRP00000029958Uncharacterized protein. (133 aa)
Your Current Organism:
Neolamprologus brichardi
NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid
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