STRINGSTRING
LOC102793844 LOC102793844 LOC102793769 LOC102793769 LOC102781372 LOC102781372 LOC102783881 LOC102783881 LOC102778156 LOC102778156 POLR2E POLR2E ENSNBRP00000029958 ENSNBRP00000029958 LOC102784784 LOC102784784 ENSNBRP00000031465 ENSNBRP00000031465 LOC102782291 LOC102782291 LOC102785041 LOC102785041 LOC102795505 LOC102795505 LOC102794895 LOC102794895 ENSNBRP00000026370 ENSNBRP00000026370 LOC102777574 LOC102777574 LOC102778644 LOC102778644 LOC102786498 LOC102786498 LOC102783312 LOC102783312 LOC102787225 LOC102787225 ENSNBRP00000024363 ENSNBRP00000024363 ENSNBRP00000024306 ENSNBRP00000024306 LOC102783590 LOC102783590 LOC102776017 LOC102776017 LOC102800267 LOC102800267 ENSNBRP00000022891 ENSNBRP00000022891 ENSNBRP00000022888 ENSNBRP00000022888 LOC102800054 LOC102800054 LOC102794054 LOC102794054 LOC102797047 LOC102797047 LOC102784403 LOC102784403 LOC102790343 LOC102790343 LOC102794995 LOC102794995 LOC102800182 LOC102800182 LOC102788076 LOC102788076 LOC102795204 LOC102795204 LOC102788097 LOC102788097 LOC102798782 LOC102798782 LOC102799538 LOC102799538 ENSNBRP00000019510 ENSNBRP00000019510 LOC102787965 LOC102787965 NCBP1 NCBP1 ENSNBRP00000018850 ENSNBRP00000018850 LOC102790510 LOC102790510 LOC102788248 LOC102788248 ENSNBRP00000017935 ENSNBRP00000017935 LOC102789994 LOC102789994 LOC102788418 LOC102788418 LOC102798418 LOC102798418 LOC102796473 LOC102796473 LOC102779180 LOC102779180 ENSNBRP00000016041 ENSNBRP00000016041 ENSNBRP00000015917 ENSNBRP00000015917 LOC102781735 LOC102781735 LOC102793352 LOC102793352 LOC102781233 LOC102781233 LOC102788280 LOC102788280 LOC102777593 LOC102777593 LOC102778780 LOC102778780 LOC102800144 LOC102800144 LOC102776387 LOC102776387 ENSNBRP00000009106 ENSNBRP00000009106 LOC102786208 LOC102786208 ENSNBRP00000008466 ENSNBRP00000008466 ENSNBRP00000008297 ENSNBRP00000008297 ENSNBRP00000008073 ENSNBRP00000008073 ENSNBRP00000007842 ENSNBRP00000007842 LOC102783842 LOC102783842 LOC102780252 LOC102780252 LOC102796073 LOC102796073 LOC102798760 LOC102798760 LOC102794551 LOC102794551 LOC102784396 LOC102784396 LOC102787745 LOC102787745 LOC102799546 LOC102799546 LOC102777330 LOC102777330 ENSNBRP00000005180 ENSNBRP00000005180 LOC102778097 LOC102778097 ENSNBRP00000004964 ENSNBRP00000004964 LOC102784961 LOC102784961 LOC102781317 LOC102781317 LOC102798705 LOC102798705 ENSNBRP00000004416 ENSNBRP00000004416 ENSNBRP00000004390 ENSNBRP00000004390 ENSNBRP00000004320 ENSNBRP00000004320 LOC102785374 LOC102785374 LOC102786694 LOC102786694 LOC102795507 LOC102795507 LOC102782116 LOC102782116 LOC102781565 LOC102781565 LOC102776076 LOC102776076 LOC102776314 LOC102776314 ENSNBRP00000003053 ENSNBRP00000003053 ENSNBRP00000002642 ENSNBRP00000002642 LOC102790493 LOC102790493 LOC102780547 LOC102780547 LOC102779365 LOC102779365 LOC102791558 LOC102791558 LOC102778911 LOC102778911 LOC102788508 LOC102788508 LOC102791705 LOC102791705 ENSNBRP00000001204 ENSNBRP00000001204 LOC102785323 LOC102785323 LOC102784088 LOC102784088 LOC102799605 LOC102799605
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102793844Small nuclear RNA activating complex, polypeptide 5. (119 aa)
LOC102793769Integrator complex subunit 3. (1019 aa)
LOC102781372Integrator complex subunit 7. (960 aa)
LOC102783881TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (742 aa)
LOC102778156Uncharacterized protein. (618 aa)
POLR2ERNA polymerase II subunit E. (183 aa)
ENSNBRP00000029958Uncharacterized protein. (133 aa)
LOC102784784Small nuclear RNA activating complex, polypeptide 1b. (352 aa)
ENSNBRP00000031465ARS2 domain-containing protein. (182 aa)
LOC102782291TATA-box binding protein associated factor 13. (124 aa)
LOC102785041TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (638 aa)
LOC102795505POU domain protein. (701 aa)
LOC102794895Si:ch211-13k12.2. (431 aa)
ENSNBRP00000026370ELL domain-containing protein. (73 aa)
LOC102777574TBP-like 1. (192 aa)
LOC102778644Serrate RNA effector molecule homolog (Arabidopsis). (863 aa)
LOC102786498General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (253 aa)
LOC102783312Cyclin K; Belongs to the cyclin family. (496 aa)
LOC102787225Elongation factor, RNA polymerase II, 2. (668 aa)
ENSNBRP00000024363POU domain protein. (328 aa)
ENSNBRP00000024306General transcription factor IIA, 1. (319 aa)
LOC102783590Interactor of little elongator complex ELL subunit 2. (830 aa)
LOC102776017Integrator complex subunit 9. (612 aa)
LOC102800267Integrator complex subunit 2. (1138 aa)
ENSNBRP00000022891CID domain-containing protein. (78 aa)
ENSNBRP00000022888CID domain-containing protein. (100 aa)
LOC102800054Transcription initiation factor IIE subunit beta; Recruits TFIIH to the initiation complex and stimulates the RNA polymerase II C-terminal domain kinase and DNA-dependent ATPase activities of TFIIH. Both TFIIH and TFIIE are required for promoter clearance by RNA polymerase. (286 aa)
LOC102794054Integrator complex subunit 8. (930 aa)
LOC102797047Integrator complex subunit 14. (460 aa)
LOC102784403Zinc finger CCCH-type containing 4. (1366 aa)
LOC102790343TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (235 aa)
LOC102794995Nucleic acid binding protein 1a. (220 aa)
LOC102800182Transmembrane O-mannosyltransferase targeting cadherins 2b. (676 aa)
LOC102788076Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family. (117 aa)
LOC102795204Integrator complex subunit 1. (2186 aa)
LOC102788097Integrator complex subunit 6 like. (896 aa)
LOC102798782Zinc finger protein 143b. (627 aa)
LOC102799538Zinc finger CCCH-type containing 6. (966 aa)
ENSNBRP00000019510Uncharacterized protein. (61 aa)
LOC102787965Cyclin T2; Belongs to the cyclin family. (681 aa)
NCBP1Nuclear cap binding protein subunit 1. (620 aa)
ENSNBRP00000018850Uncharacterized protein. (312 aa)
LOC102790510Transmembrane O-mannosyltransferase targeting cadherins 3. (902 aa)
LOC102788248Cyclin T2b; Belongs to the cyclin family. (548 aa)
ENSNBRP00000017935Polymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
LOC102789994POU domain protein. (655 aa)
LOC102788418Polymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
LOC102798418Integrator complex subunit 12. (448 aa)
LOC102796473TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (204 aa)
LOC102779180General transcription factor IIE, polypeptide 1, alpha. (330 aa)
ENSNBRP00000016041ELL domain-containing protein. (73 aa)
ENSNBRP00000015917Uncharacterized protein. (130 aa)
LOC102781735Regulation of nuclear pre-mRNA domain containing 1A. (294 aa)
LOC102793352Elongation factor RNA polymerase II. (629 aa)
LOC102781233POU domain protein. (339 aa)
LOC102788280Integrator complex subunit 10. (714 aa)
LOC102777593Uncharacterized protein. (161 aa)
LOC102778780Phosphorylated adaptor for RNA export. (409 aa)
LOC102800144Cyclin Q; Belongs to the cyclin family. (254 aa)
LOC102776387Transcription initiation factor IIF subunit alpha; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. Belongs to the TFIIF alpha subunit family. (503 aa)
ENSNBRP00000009106Uncharacterized protein. (63 aa)
LOC102786208TATA box binding protein like 2. (320 aa)
ENSNBRP00000008466Polymerase (RNA) II (DNA directed) polypeptide J. (128 aa)
ENSNBRP00000008297Uncharacterized protein. (262 aa)
ENSNBRP00000008073Uncharacterized protein. (107 aa)
ENSNBRP00000007842Uncharacterized protein. (202 aa)
LOC102783842SSU72 homolog, RNA polymerase II CTD phosphatase. (194 aa)
LOC102780252Transmembrane O-mannosyltransferase targeting cadherins 2a. (818 aa)
LOC102796073POU domain protein. (612 aa)
LOC102798760Transcription elongation factor SPT5. (1169 aa)
LOC102794551General transcription factor IIF subunit 2; TFIIF is a general transcription initiation factor that binds to RNA polymerase II and helps to recruit it to the initiation complex in collaboration with TFIIB. It promotes transcription elongation. This subunit shows ATP-dependent DNA-helicase activity. (256 aa)
LOC102784396Cyclin-dependent kinase 9 (CDC2-related kinase); Belongs to the protein kinase superfamily. (372 aa)
LOC102787745POU domain protein. (707 aa)
LOC102799546TATA box binding protein. (251 aa)
LOC102777330TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor. (597 aa)
ENSNBRP00000005180Transcription initiation factor IIA subunit 2; TFIIA is a component of the transcription machinery of RNA polymerase II and plays an important role in transcriptional activation; Belongs to the TFIIA subunit 2 family. (123 aa)
LOC102778097Polymerase (RNA) II (DNA directed) polypeptide C. (204 aa)
ENSNBRP00000004964Sp1 transcription factor. (470 aa)
LOC102784961Polymerase (RNA) II (DNA directed) polypeptide G-like. (162 aa)
LOC102781317Cyclin-dependent kinase 7. (306 aa)
LOC102798705Uncharacterized protein. (324 aa)
ENSNBRP00000004416Vac14_Fab1_bd domain-containing protein. (94 aa)
ENSNBRP00000004390Uncharacterized protein. (273 aa)
ENSNBRP00000004320CID domain-containing protein. (262 aa)
LOC102785374General transcription factor IIB. (289 aa)
LOC102786694POU domain protein. (370 aa)
LOC102795507Integrator complex subunit 13. (720 aa)
LOC102782116RNA polymerase II associated protein 2. (297 aa)
LOC102781565Integrator complex subunit 11. (560 aa)
LOC102776076Regulation of nuclear pre-mRNA domain containing 1B. (328 aa)
LOC102776314Polymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
ENSNBRP00000003053TFIIB-type domain-containing protein. (215 aa)
ENSNBRP00000002642Uncharacterized protein. (155 aa)
LOC102790493DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1928 aa)
LOC102780547Integrator complex subunit 5. (1004 aa)
LOC102779365TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor. (314 aa)
LOC102791558DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
LOC102778911Integrator complex subunit 6. (858 aa)
LOC102788508Transmembrane O-mannosyltransferase targeting cadherins 4. (706 aa)
LOC102791705DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
ENSNBRP00000001204Uncharacterized protein. (50 aa)
LOC102785323DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
LOC102784088Transmembrane O-mannosyltransferase targeting cadherins 1. (676 aa)
LOC102799605Cyclin T1; Belongs to the cyclin family. (686 aa)
Your Current Organism:
Neolamprologus brichardi
NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid
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