STRINGSTRING
LOC102778261 LOC102778261 LOC102785182 LOC102785182 LOC102783638 LOC102783638 LOC102782566 LOC102782566 LOC102793097 LOC102793097 LOC102791705 LOC102791705 LOC102791864 LOC102791864 LOC102793541 LOC102793541 ENSNBRP00000002434 ENSNBRP00000002434 LOC102790198 LOC102790198 LOC102793717 LOC102793717 ENSNBRP00000002642 ENSNBRP00000002642 LOC102776314 LOC102776314 LOC102784677 LOC102784677 ENSNBRP00000004100 ENSNBRP00000004100 ENSNBRP00000004138 ENSNBRP00000004138 LOC102797579 LOC102797579 LOC102781317 LOC102781317 LOC102799546 LOC102799546 LOC102791708 LOC102791708 LOC102789869 LOC102789869 ENSNBRP00000006487 ENSNBRP00000006487 ENSNBRP00000007031 ENSNBRP00000007031 LOC102786208 LOC102786208 LOC102791015 LOC102791015 LOC102785194 LOC102785194 LOC102778834 LOC102778834 H4C8 H4C8 ENSNBRP00000011347 ENSNBRP00000011347 ENSNBRP00000011364 ENSNBRP00000011364 LOC102792666 LOC102792666 LOC102777593 LOC102777593 LOC102794493 LOC102794493 LOC102796730 LOC102796730 LOC102776995 LOC102776995 LOC102788330 LOC102788330 LOC102799595 LOC102799595 LOC102784485 LOC102784485 LOC102791667 LOC102791667 LOC102799948 LOC102799948 ENSNBRP00000016221 ENSNBRP00000016221 LOC102788170 LOC102788170 LOC102788418 LOC102788418 LOC102776866 LOC102776866 ENSNBRP00000017935 ENSNBRP00000017935 ENSNBRP00000017962 ENSNBRP00000017962 ENSNBRP00000018054 ENSNBRP00000018054 ENSNBRP00000018067 ENSNBRP00000018067 ENSNBRP00000018166 ENSNBRP00000018166 H3-3B H3-3B H3C14 H3C14 ENSNBRP00000018286 ENSNBRP00000018286 LOC102791250 LOC102791250 LOC102789826 LOC102789826 ENSNBRP00000019844 ENSNBRP00000019844 LOC102781245 LOC102781245 ENSNBRP00000021224 ENSNBRP00000021224 LOC102797007 LOC102797007 LOC102788568 LOC102788568 LOC102793248 LOC102793248 ENSNBRP00000022384 ENSNBRP00000022384 H4C6 H4C6 LOC102781675 LOC102781675 ENSNBRP00000023653 ENSNBRP00000023653 ENSNBRP00000023778 ENSNBRP00000023778 ENSNBRP00000024038 ENSNBRP00000024038 LOC102787536 LOC102787536 LOC102777369 LOC102777369 LOC102785915 LOC102785915 LOC102785471 LOC102785471 LOC102777574 LOC102777574 LOC102794495 LOC102794495 LOC102792578 LOC102792578 ENSNBRP00000027002 ENSNBRP00000027002 LOC102787488 LOC102787488 LOC102785979 LOC102785979 POLR2E POLR2E LOC102789432 LOC102789432 LOC102798420 LOC102798420 LOC102777002 LOC102777002
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
LOC102778261Methyl-CpG binding domain protein 2. (265 aa)
LOC102785182Retinoblastoma binding protein 4. (424 aa)
LOC102783638DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1685 aa)
LOC102782566Chromodomain helicase DNA binding protein 3. (1648 aa)
LOC102793097Retinoblastoma binding protein 4, like. (427 aa)
LOC102791705DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
LOC102791864DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (128 aa)
LOC102793541General transcription factor IIH subunit 4; Component of the general transcription and DNA repair factor IIH (TFIIH) core complex which is involved in general and transcription-coupled nucleotide excision repair (NER) of damaged DNA. Belongs to the TFB2 family. (428 aa)
ENSNBRP00000002434Histone H2A; Belongs to the histone H2A family. (124 aa)
LOC102790198Histone H3; Belongs to the histone H3 family. (136 aa)
LOC102793717Cyclin H; Belongs to the cyclin family. (331 aa)
ENSNBRP00000002642Uncharacterized protein. (155 aa)
LOC102776314Polymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
LOC102784677Chromodomain helicase DNA binding protein 4a. (1524 aa)
ENSNBRP00000004100Histone H2A; Belongs to the histone H2A family. (118 aa)
ENSNBRP00000004138Uncharacterized protein. (618 aa)
LOC102797579Upstream binding transcription factor. (616 aa)
LOC102781317Cyclin-dependent kinase 7. (306 aa)
LOC102799546TATA box binding protein. (251 aa)
LOC102791708TATA box binding protein (Tbp)-associated factor, RNA polymerase I, B. (590 aa)
LOC102789869Chromobox homolog 3a (HP1 gamma homolog, Drosophila). (182 aa)
ENSNBRP00000006487Histone H2A; Belongs to the histone H2A family. (140 aa)
ENSNBRP00000007031Histone H2A; Belongs to the histone H2A family. (125 aa)
LOC102786208TATA box binding protein like 2. (320 aa)
LOC102791015Histone H3; Belongs to the histone H3 family. (136 aa)
LOC102785194TWIST neighbor. (374 aa)
LOC102778834Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (103 aa)
H4C8Histone H4-like. (103 aa)
ENSNBRP00000011347Histone H2A; Belongs to the histone H2A family. (140 aa)
ENSNBRP00000011364Histone H2B; Belongs to the histone H2B family. (63 aa)
LOC102792666General transcription factor IIH, polypeptide 3. (300 aa)
LOC102777593Uncharacterized protein. (161 aa)
LOC102794493CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. (311 aa)
LOC102796730Excision repair cross-complementation group 6. (1412 aa)
LOC102776995Metastasis associated 1. (682 aa)
LOC102788330Metastasis associated 1 family, member 3. (574 aa)
LOC102799595Methyl-CpG binding domain protein 3a. (274 aa)
LOC102784485Uncharacterized protein. (1773 aa)
LOC102791667Histone H2B; Belongs to the histone H2B family. (116 aa)
LOC102799948RRN3 homolog, RNA polymerase I transcription factor. (409 aa)
ENSNBRP00000016221HMG box domain-containing protein. (174 aa)
LOC102788170General transcription factor IIH subunit. (392 aa)
LOC102788418Polymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
LOC102776866General transcription factor IIH, polypeptide 1. (501 aa)
ENSNBRP00000017935Polymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
ENSNBRP00000017962Germ cell nuclear acidic peptidase. (439 aa)
ENSNBRP00000018054Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (93 aa)
ENSNBRP00000018067Histone H2B; Belongs to the histone H2B family. (159 aa)
ENSNBRP00000018166Histone H2A; Belongs to the histone H2A family. (140 aa)
H3-3BHistone H3.3-like. (136 aa)
H3C14Histone H3; Belongs to the histone H3 family. (137 aa)
ENSNBRP00000018286Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (92 aa)
LOC102791250Histone H2A; Belongs to the histone H2A family. (128 aa)
LOC102789826Cyclin D binding myb-like transcription factor 1. (653 aa)
ENSNBRP00000019844Histone H2A; Belongs to the histone H2A family. (134 aa)
LOC102781245Autoimmune regulator. (377 aa)
ENSNBRP00000021224Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling. (95 aa)
LOC102797007Excision repair cross-complementation group 2. (623 aa)
LOC102788568CD3e molecule, epsilon associated protein. (345 aa)
LOC102793248RNA polymerase I subunit E. (420 aa)
ENSNBRP00000022384Upstream binding transcription factor, like. (658 aa)
H4C6Histone H4-like. (103 aa)
LOC102781675DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1134 aa)
ENSNBRP00000023653Histone H2B; Belongs to the histone H2B family. (154 aa)
ENSNBRP00000023778Histone H3; Belongs to the histone H3 family. (99 aa)
ENSNBRP00000024038GATA zinc finger domain containing 2B. (432 aa)
LOC102787536RNA polymerase I and III subunit C. (351 aa)
LOC102777369General transcription factor IIH, polypeptide 5. (71 aa)
LOC102785915Excision repair cross-complementation group 3. (783 aa)
LOC102785471GATA zinc finger domain containing 2A. (592 aa)
LOC102777574TBP-like 1. (192 aa)
LOC102794495Uncharacterized protein. (239 aa)
LOC102792578WD_REPEATS_REGION domain-containing protein. (425 aa)
ENSNBRP00000027002Histone H2A; Belongs to the histone H2A family. (134 aa)
LOC102787488Uncharacterized protein. (1817 aa)
LOC102785979TATA box binding protein (TBP)-associated factor, RNA polymerase I, A. (392 aa)
POLR2ERNA polymerase II subunit E. (183 aa)
LOC102789432Histone H3.3-like. (136 aa)
LOC102798420Metastasis associated 1 family, member 2. (597 aa)
LOC102777002GATA zinc finger domain containing 2Ab. (599 aa)
Your Current Organism:
Neolamprologus brichardi
NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid
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