53 items (Neolamprologus brichardi) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	LOC102784961	Polymerase (RNA) II (DNA directed) polypeptide G-like. (162 aa)
	LOC102798306	DNA-directed RNA polymerase III subunit RPC6; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Specific peripheric component of RNA polymerase III which synthesizes small RNAs, such as 5S rRNA and tRNAs; Belongs to the eukaryotic RPC34/RPC39 RNA polymerase subunit family. (316 aa)
	LOC102780430	RBR-type E3 ubiquitin transferase. (446 aa)
	ENSNBRP00000029368	LSM14 domain-containing protein. (105 aa)
	ENSNBRP00000029686	LSM14 domain-containing protein. (133 aa)
	POLR2E	RNA polymerase II subunit E. (183 aa)
	ENSNBRP00000029958	Uncharacterized protein. (133 aa)
	LOC102786294	Zgc:171971. (343 aa)
	TCEANC	Transcription elongation factor A N-terminal and central domain containing. (325 aa)
	ENSNBRP00000000331	Uncharacterized protein. (94 aa)
	LOC102783638	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1685 aa)
	ENSNBRP00000000719	Transcription elongation factor A (SII), 3. (298 aa)
	LOC102785323	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)
	LOC102794408	TFIIS N-terminal domain-containing protein. (605 aa)
	LOC102791705	DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively. (150 aa)
	LOC102791864	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (128 aa)
	LOC102780684	Piwi domain-containing protein. (204 aa)
	LOC102791558	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1174 aa)
	LOC102790493	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1928 aa)
	LOC102776314	Polymerase (RNA) II (DNA directed) polypeptide F. (127 aa)
	LOC102782360	Polymerase (RNA) III (DNA directed) polypeptide H. (228 aa)
	LOC102789695	Polymerase (RNA) III (DNA directed) polypeptide B; Belongs to the RNA polymerase beta chain family. (1102 aa)
	LOC102778870	Angel homolog 1 (Drosophila). (672 aa)
	LOC102793222	RNA polymerase III subunit C3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (547 aa)
	LOC102778313	TFIIS N-terminal domain-containing protein. (574 aa)
	LOC102778097	Polymerase (RNA) II (DNA directed) polypeptide C. (204 aa)
	LOC102787321	LSM14A mRNA processing body assembly factor a. (476 aa)
	LOC102780663	RBR-type E3 ubiquitin transferase. (472 aa)
	ENSNBRP00000008466	Polymerase (RNA) II (DNA directed) polypeptide J. (128 aa)
	ENSNBRP00000009106	Uncharacterized protein. (63 aa)
	LOC102798279	LSM14A mRNA processing body assembly factor b. (468 aa)
	LOC102789182	Transcription elongation factor A (SII), 2. (284 aa)
	LOC102785194	TWIST neighbor. (374 aa)
	LOC102775622	Polymerase (RNA) III (DNA directed) polypeptide E. (542 aa)
	ENSNBRP00000011303	Uncharacterized protein. (206 aa)
	LOC102795371	Transcription elongation factor A (SII), 1. (325 aa)
	ENSNBRP00000012038	Angel homolog 2 (Drosophila). (227 aa)
	LOC102799352	Transcriptional adapter. (420 aa)
	ENSNBRP00000015847	DPH-type MB domain-containing protein. (100 aa)
	LOC102793946	Uncharacterized protein. (207 aa)
	LOC102788418	Polymerase (RNA) II (DNA directed) polypeptide K. (58 aa)
	ENSNBRP00000017935	Polymerase (RNA) II (DNA directed) polypeptide L. (67 aa)
	ENSNBRP00000018010	Uncharacterized protein. (557 aa)
	ENSNBRP00000018039	TFIIS central domain-containing protein. (306 aa)
	LOC102787351	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1360 aa)
	LOC102785137	RPOL9 domain-containing protein. (93 aa)
	LOC102788568	CD3e molecule, epsilon associated protein. (345 aa)
	LOC102793248	RNA polymerase I subunit E. (420 aa)
	LOC102781675	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1134 aa)
	LOC102787536	RNA polymerase I and III subunit C. (351 aa)
	LOC102786318	Polymerase (RNA) III (DNA directed) polypeptide D. (391 aa)
	LOC102779865	Transcriptional adaptor 2A. (381 aa)
	LOC102782584	RNA polymerase I and III subunit D. (114 aa)

Your Current Organism:

Neolamprologus brichardi

NCBI taxonomy Id: 32507
Other names: Lamprologus brichardi, N. brichardi, lyretail cichlid

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ENSNBRP00000000331	ENSNBRP00000000719	ENSNBRP00000000331	ENSNBRP00000000719	Uncharacterized protein.	Transcription elongation factor A (SII), 3.	0.819
ENSNBRP00000000331	ENSNBRP00000009106	ENSNBRP00000000331	ENSNBRP00000009106	Uncharacterized protein.	Uncharacterized protein.	0.581
ENSNBRP00000000331	ENSNBRP00000017935	ENSNBRP00000000331	ENSNBRP00000017935	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide L.	0.985
ENSNBRP00000000331	LOC102775622	ENSNBRP00000000331	ENSNBRP00000011195	Uncharacterized protein.	Polymerase (RNA) III (DNA directed) polypeptide E.	0.990
ENSNBRP00000000331	LOC102776314	ENSNBRP00000000331	ENSNBRP00000003092	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide F.	0.993
ENSNBRP00000000331	LOC102778097	ENSNBRP00000000331	ENSNBRP00000005134	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide C.	0.975
ENSNBRP00000000331	LOC102778313	ENSNBRP00000000331	ENSNBRP00000004919	Uncharacterized protein.	TFIIS N-terminal domain-containing protein.	0.819
ENSNBRP00000000331	LOC102781675	ENSNBRP00000000331	ENSNBRP00000023512	Uncharacterized protein.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.965
ENSNBRP00000000331	LOC102782360	ENSNBRP00000000331	ENSNBRP00000004130	Uncharacterized protein.	Polymerase (RNA) III (DNA directed) polypeptide H.	0.990
ENSNBRP00000000331	LOC102782584	ENSNBRP00000000331	ENSNBRP00000026610	Uncharacterized protein.	RNA polymerase I and III subunit D.	0.993
ENSNBRP00000000331	LOC102783638	ENSNBRP00000000331	ENSNBRP00000000544	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.975
ENSNBRP00000000331	LOC102784961	ENSNBRP00000000331	ENSNBRP00000004955	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide G-like.	0.406
ENSNBRP00000000331	LOC102785137	ENSNBRP00000000331	ENSNBRP00000019412	Uncharacterized protein.	RPOL9 domain-containing protein.	0.993
ENSNBRP00000000331	LOC102785194	ENSNBRP00000000331	ENSNBRP00000011091	Uncharacterized protein.	TWIST neighbor.	0.560
ENSNBRP00000000331	LOC102785323	ENSNBRP00000000331	ENSNBRP00000000830	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family.	0.833
ENSNBRP00000000331	LOC102786294	ENSNBRP00000000331	ENSNBRP00000030172	Uncharacterized protein.	Zgc:171971.	0.978
ENSNBRP00000000331	LOC102786318	ENSNBRP00000000331	ENSNBRP00000025161	Uncharacterized protein.	Polymerase (RNA) III (DNA directed) polypeptide D.	0.981
ENSNBRP00000000331	LOC102787351	ENSNBRP00000000331	ENSNBRP00000018581	Uncharacterized protein.	DNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.990
ENSNBRP00000000331	LOC102787536	ENSNBRP00000000331	ENSNBRP00000024518	Uncharacterized protein.	RNA polymerase I and III subunit C.	0.991
ENSNBRP00000000331	LOC102788418	ENSNBRP00000000331	ENSNBRP00000017536	Uncharacterized protein.	Polymerase (RNA) II (DNA directed) polypeptide K.	0.983