STRINGSTRING
Sbal_0248 Sbal_0248 Sbal_0494 Sbal_0494 Sbal_0633 Sbal_0633 fbp fbp pgk pgk Sbal_0830 Sbal_0830 pgi pgi Sbal_1321 Sbal_1321 Sbal_1406 Sbal_1406 Sbal_1444 Sbal_1444 Sbal_1725 Sbal_1725 acsA acsA Sbal_1922 Sbal_1922 Sbal_2216 Sbal_2216 Sbal_2218 Sbal_2218 Sbal_2225 Sbal_2225 Sbal_2243 Sbal_2243 Sbal_2362 Sbal_2362 Sbal_2419 Sbal_2419 Sbal_2488 Sbal_2488 eno eno tpiA tpiA Sbal_3729 Sbal_3729 Sbal_3911 Sbal_3911 Sbal_3912 Sbal_3912 Sbal_3913 Sbal_3913 pckA pckA gpmI gpmI
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Sbal_0248PFAM: aldehyde dehydrogenase; KEGG: son:SO4480 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family. (506 aa)
Sbal_0494KEGG: son:SO0538 glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (337 aa)
Sbal_0633PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: ecj:JW0317 predicted oxidoreductase, Zn-dependent and NAD(P)-binding. (349 aa)
fbpPFAM: Inositol phosphatase/fructose-1,6-bisphosphatase; KEGG: shm:Shewmr7_3373 inositol phosphatase/fructose-1,6-bisphosphatase. (342 aa)
pgkPFAM: phosphoglycerate kinase; KEGG: son:SO0932 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (391 aa)
Sbal_0830Fructose-bisphosphate aldolase; Catalyzes the aldol condensation of dihydroxyacetone phosphate (DHAP or glycerone-phosphate) with glyceraldehyde 3-phosphate (G3P) to form fructose 1,6-bisphosphate (FBP) in gluconeogenesis and the reverse reaction in glycolysis. (355 aa)
pgiPFAM: phosphoglucose isomerase (PGI); KEGG: shn:Shewana3_3148 phosphoglucose isomerase (PGI); Belongs to the GPI family. (545 aa)
Sbal_1321PFAM: iron-containing alcohol dehydrogenase; KEGG: shm:Shewmr7_2840 iron-containing alcohol dehydrogenase. (382 aa)
Sbal_1406PFAM: ROK family protein; KEGG: bfr:BF1751 ROK family transcriptional repressor. (282 aa)
Sbal_1444TIGRFAM: PTS system, glucose-like IIB subunint; PFAM: phosphotransferase system PTS, EIIB protein; phosphotransferase system, EIIC; KEGG: she:Shewmr4_2648 PTS system, glucose-like IIB subunint. (495 aa)
Sbal_1725PFAM: Aldose 1-epimerase; KEGG: son:SO2769 hypothetical protein; Belongs to the glucose-6-phosphate 1-epimerase family. (282 aa)
acsAAcetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. (650 aa)
Sbal_1922PFAM: iron-containing alcohol dehydrogenase; aldehyde dehydrogenase; KEGG: she:Shewmr4_1683 iron-containing alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family. (867 aa)
Sbal_2216KEGG: son:SO2347 glyceraldehyde-3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (477 aa)
Sbal_2218KEGG: son:SO2345 glyceraldehyde 3-phosphate dehydrogenase; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; PFAM: glyceraldehyde 3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (336 aa)
Sbal_2225TIGRFAM: phosphoglucomutase, alpha-D-glucose phosphate-specific; PFAM: phosphoglucomutase/phosphomannomutase C terminal; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain I; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II; phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain III; KEGG: shm:Shewmr7_1944 phosphoglucomutase, alpha-D-glucose phosphate-specific. (550 aa)
Sbal_2243PFAM: pyruvate kinase; KEGG: shn:Shewana3_2153 pyruvate kinase; Belongs to the pyruvate kinase family. (479 aa)
Sbal_2362KEGG: shn:Shewana3_2258 PTS system, glucose subfamily, IIA subunit; TIGRFAM: PTS system, glucose subfamily, IIA subunit; PFAM: sugar-specific permease, EIIA 1 domain. (169 aa)
Sbal_2419PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: shn:Shewana3_1837 alcohol dehydrogenase, zinc-binding domain protein; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily. (379 aa)
Sbal_2488Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. (789 aa)
enoEnolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis. (431 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (260 aa)
Sbal_3729Aldose 1-epimerase; Converts alpha-aldose to the beta-anomer. (344 aa)
Sbal_3911TIGRFAM: dihydrolipoamide dehydrogenase; PFAM: FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glucose-inhibited division protein A; pyridine nucleotide-disulphide oxidoreductase dimerisation region; KEGG: shn:Shewana3_0428 dihydrolipoamide dehydrogenase. (475 aa)
Sbal_3912Pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (663 aa)
Sbal_39132-oxo-acid dehydrogenase E1 subunit, homodimeric type; Component of the pyruvate dehydrogenase (PDH) complex, that catalyzes the overall conversion of pyruvate to acetyl-CoA and CO(2). (888 aa)
pckAPhosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA. Belongs to the phosphoenolpyruvate carboxykinase (ATP) family. (513 aa)
gpmIPhosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (514 aa)
Your Current Organism:
Shewanella baltica
NCBI taxonomy Id: 325240
Other names: S. baltica OS155, Shewanella baltica OS155, Shewanella baltica str. OS155, Shewanella baltica strain OS155
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