(10 nodes) Mixed, incl. Glycosyl transferases group 1, and Negative regulation of signaling network (Xanthomonas axonopodis)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	KGE51949.1	Polysaccharide biosynthesis protein GumN; Derived by automated computational analysis using gene prediction method: Protein Homology. (335 aa)
	KGE51950.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa)
	KGE51951.1	Polysaccharide biosynthesis protein GumM; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyltransferase 26 family. (264 aa)
	KGE51952.1	Polysaccharide biosynthesis protein GumL; Derived by automated computational analysis using gene prediction method: Protein Homology. (264 aa)
	KGE51953.1	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (398 aa)
	KGE51954.1	Polysaccharide biosynthesis protein GumJ; Derived by automated computational analysis using gene prediction method: Protein Homology. (496 aa)
	KGE51955.1	GDP-mannose:glycolipid 4-beta-D-mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
	KGE51956.1	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology. (380 aa)
	KGE51958.1	Polysaccharide biosynthesis protein GumF; Derived by automated computational analysis using gene prediction method: Protein Homology. (362 aa)
	KGE51959.1	Polysaccharide biosynthesis protein GumE; Derived by automated computational analysis using gene prediction method: Protein Homology. (429 aa)

Your Current Organism:

Xanthomonas axonopodis

NCBI taxonomy Id: 325777
Other names: X. axonopodis pv. vasculorum, Xanthomonas axonopodis pv. vasculorum

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KGE51949.1	KGE51950.1	GW15_0211360	GW15_0211365	Polysaccharide biosynthesis protein GumN; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.536
KGE51949.1	KGE51951.1	GW15_0211360	GW15_0211370	Polysaccharide biosynthesis protein GumN; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polysaccharide biosynthesis protein GumM; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyltransferase 26 family.	0.648
KGE51949.1	KGE51952.1	GW15_0211360	GW15_0211375	Polysaccharide biosynthesis protein GumN; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polysaccharide biosynthesis protein GumL; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.527
KGE51949.1	KGE51953.1	GW15_0211360	GW15_0211380	Polysaccharide biosynthesis protein GumN; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.407
KGE51949.1	KGE51954.1	GW15_0211360	GW15_0211385	Polysaccharide biosynthesis protein GumN; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polysaccharide biosynthesis protein GumJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.403
KGE51949.1	KGE51956.1	GW15_0211360	GW15_0211395	Polysaccharide biosynthesis protein GumN; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.547
KGE51950.1	KGE51949.1	GW15_0211365	GW15_0211360	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polysaccharide biosynthesis protein GumN; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.536
KGE51950.1	KGE51951.1	GW15_0211365	GW15_0211370	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polysaccharide biosynthesis protein GumM; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyltransferase 26 family.	0.668
KGE51950.1	KGE51952.1	GW15_0211365	GW15_0211375	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polysaccharide biosynthesis protein GumL; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.668
KGE51950.1	KGE51953.1	GW15_0211365	GW15_0211380	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.568
KGE51950.1	KGE51954.1	GW15_0211365	GW15_0211385	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Polysaccharide biosynthesis protein GumJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.442
KGE51950.1	KGE51955.1	GW15_0211365	GW15_0211390	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	GDP-mannose:glycolipid 4-beta-D-mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.422
KGE51950.1	KGE51956.1	GW15_0211365	GW15_0211395	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.422
KGE51951.1	KGE51949.1	GW15_0211370	GW15_0211360	Polysaccharide biosynthesis protein GumM; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyltransferase 26 family.	Polysaccharide biosynthesis protein GumN; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.648
KGE51951.1	KGE51950.1	GW15_0211370	GW15_0211365	Polysaccharide biosynthesis protein GumM; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyltransferase 26 family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.668
KGE51951.1	KGE51952.1	GW15_0211370	GW15_0211375	Polysaccharide biosynthesis protein GumM; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyltransferase 26 family.	Polysaccharide biosynthesis protein GumL; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.916
KGE51951.1	KGE51953.1	GW15_0211370	GW15_0211380	Polysaccharide biosynthesis protein GumM; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyltransferase 26 family.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.906
KGE51951.1	KGE51954.1	GW15_0211370	GW15_0211385	Polysaccharide biosynthesis protein GumM; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyltransferase 26 family.	Polysaccharide biosynthesis protein GumJ; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.855
KGE51951.1	KGE51955.1	GW15_0211370	GW15_0211390	Polysaccharide biosynthesis protein GumM; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyltransferase 26 family.	GDP-mannose:glycolipid 4-beta-D-mannosyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.851
KGE51951.1	KGE51956.1	GW15_0211370	GW15_0211395	Polysaccharide biosynthesis protein GumM; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyltransferase 26 family.	Glycosyl transferase family 1; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.978