STRINGSTRING
KGE53662.1 KGE53662.1 KGE53278.1 KGE53278.1 KGE52723.1 KGE52723.1 KGE52724.1 KGE52724.1 KGE52725.1 KGE52725.1 KGE51939.1 KGE51939.1 KGE51760.1 KGE51760.1 KGE50993.1 KGE50993.1 KGE51033.1 KGE51033.1 KGE50842.1 KGE50842.1 KGE50843.1 KGE50843.1 KGE50699.1 KGE50699.1 KGE50638.1 KGE50638.1 KGE50602.1 KGE50602.1 KGE50452.1 KGE50452.1 KGE50453.1 KGE50453.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
KGE53662.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (52 aa)
KGE53278.1Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (123 aa)
KGE52723.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (172 aa)
KGE52724.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (219 aa)
KGE52725.1Lipase; Derived by automated computational analysis using gene prediction method: Protein Homology. (428 aa)
KGE51939.1General stress protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (66 aa)
KGE51760.1Peroxiredoxin; Derived by automated computational analysis using gene prediction method: Protein Homology. (144 aa)
KGE50993.1NADPH-dependent FMN reductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (189 aa)
KGE51033.1NAD(P)H-quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the WrbA family. (198 aa)
KGE50842.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (186 aa)
KGE50843.1Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method: Protein Homology. (97 aa)
KGE50699.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0337 (CsbD) family. (69 aa)
KGE50638.1Ferritin; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the Dps family. (182 aa)
KGE50602.1Stress-induced protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (85 aa)
KGE50452.1Organic hydroperoxide resistance protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (142 aa)
KGE50453.1MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (153 aa)
Your Current Organism:
Xanthomonas axonopodis
NCBI taxonomy Id: 325777
Other names: X. axonopodis pv. vasculorum, Xanthomonas axonopodis pv. vasculorum
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