STRINGSTRING
Cagg_2128 Cagg_2128 Cagg_2442 Cagg_2442 Cagg_0192 Cagg_0192 Cagg_0937 Cagg_0937 Cagg_2105 Cagg_2105 Cagg_3041 Cagg_3041 Cagg_2983 Cagg_2983 Cagg_2970 Cagg_2970 Cagg_2465 Cagg_2465
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cagg_2128TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cau:Caur_1413 phytoene desaturase. (504 aa)
Cagg_2442PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cau:Caur_0994 amine oxidase. (427 aa)
Cagg_0192KEGG: cau:Caur_2746 secreted hydrolase-like protein. (374 aa)
Cagg_0937PFAM: Squalene/phytoene synthase; KEGG: cau:Caur_2684 squalene/phytoene synthase. (331 aa)
Cagg_2105PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cau:Caur_1337 FAD dependent oxidoreductase. (554 aa)
Cagg_3041Carotene 7,8-desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cau:Caur_2352 carotene 7,8-desaturase. (463 aa)
Cagg_2983TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cau:Caur_2410 phytoene desaturase. (495 aa)
Cagg_2970TIGRFAM: phytoene desaturase; PFAM: amine oxidase; FAD dependent oxidoreductase; KEGG: cau:Caur_2422 phytoene desaturase. (493 aa)
Cagg_2465Hypothetical protein; KEGG: hau:Haur_1711 FAD dependent oxidoreductase. (427 aa)
Your Current Organism:
Chloroflexus aggregans
NCBI taxonomy Id: 326427
Other names: C. aggregans DSM 9485, Chloroflexus aggregans DSM 9485, Chloroflexus aggregans MD-66, Chloroflexus aggregans str. DSM 9485, Chloroflexus aggregans strain DSM 9485
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