STRINGSTRING
Cagg_1076 Cagg_1076 Cagg_3752 Cagg_3752 Cagg_3205 Cagg_3205 Cagg_3180 Cagg_3180 Cagg_2712 Cagg_2712 Cagg_2488 Cagg_2488 Cagg_2274 Cagg_2274 Cagg_2094 Cagg_2094 Cagg_2092 Cagg_2092 glgB glgB Cagg_2090 Cagg_2090 glgE glgE Cagg_1307 Cagg_1307
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cagg_1076KEGG: cau:Caur_2882 alpha amylase domain-containing protein. (685 aa)
Cagg_3752KEGG: cau:Caur_3107 glycogen debranching enzyme GlgX; TIGRFAM: glycogen debranching enzyme GlgX; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family. (720 aa)
Cagg_3205PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cau:Caur_0517 alpha amylase catalytic region. (583 aa)
Cagg_3180PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cau:Caur_0493 alpha amylase catalytic region. (635 aa)
Cagg_2712KEGG: cau:Caur_0879 alpha-1,6-glucosidase, pullulanase-type; TIGRFAM: alpha-1,6-glucosidase, pullulanase-type; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; alpha amylase all-beta; SMART: alpha amylase catalytic sub domain. (2156 aa)
Cagg_2488KEGG: cau:Caur_1313 alpha-1,6-glucosidase, pullulanase-type; TIGRFAM: alpha-1,6-glucosidase, pullulanase-type; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; Belongs to the glycosyl hydrolase 13 family. (1176 aa)
Cagg_2274PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cau:Caur_1536 alpha amylase catalytic region; Belongs to the glycosyl hydrolase 13 family. (614 aa)
Cagg_2094KEGG: cau:Caur_1164 malto-oligosyltrehalose synthase; TIGRFAM: malto-oligosyltrehalose synthase; PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain. (986 aa)
Cagg_2092KEGG: cau:Caur_1162 malto-oligosyltrehalose trehalohydrolase; TIGRFAM: malto-oligosyltrehalose trehalohydrolase; PFAM: glycoside hydrolase family 13 domain protein; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain. (592 aa)
glgB1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily. (677 aa)
Cagg_2090KEGG: cau:Caur_1160 trehalose synthase; TIGRFAM: trehalose synthase; trehalose synthase-fused possible maltokinase; PFAM: aminoglycoside phosphotransferase; alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain. (1119 aa)
glgEAlpha amylase catalytic region; Maltosyltransferase that uses maltose 1-phosphate (M1P) as the sugar donor to elongate linear or branched alpha-(1->4)-glucans. Is involved in a branched alpha-glucan biosynthetic pathway from trehalose, together with TreS, Mak and GlgB. (679 aa)
Cagg_1307PFAM: alpha amylase catalytic region; SMART: alpha amylase catalytic sub domain; KEGG: cau:Caur_2539 alpha amylase catalytic region. (652 aa)
Your Current Organism:
Chloroflexus aggregans
NCBI taxonomy Id: 326427
Other names: C. aggregans DSM 9485, Chloroflexus aggregans DSM 9485, Chloroflexus aggregans MD-66, Chloroflexus aggregans str. DSM 9485, Chloroflexus aggregans strain DSM 9485
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.