STRINGSTRING
Cagg_0583 Cagg_0583 Cagg_0632 Cagg_0632 Cagg_1616 Cagg_1616 Cagg_1883 Cagg_1883 Cagg_2096 Cagg_2096 Cagg_2110 Cagg_2110 Cagg_2636 Cagg_2636 Cagg_3652 Cagg_3652 Cagg_3767 Cagg_3767
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Cagg_0583PFAM: Transketolase central region; Transketolase domain protein; KEGG: cau:Caur_3671 transketolase central region. (344 aa)
Cagg_0632PFAM: Transketolase central region; Transketolase domain protein; KEGG: cau:Caur_2805 transketolase central region. (773 aa)
Cagg_1616Transketolase central region; The pyruvate dehydrogenase complex catalyzes the overall conversion of pyruvate to acetyl-CoA and CO2. (332 aa)
Cagg_1883TIGRFAM: transketolase; PFAM: Transketolase domain protein; Transketolase central region; KEGG: cau:Caur_1827 transketolase; Belongs to the transketolase family. (672 aa)
Cagg_2096PFAM: Transketolase central region; Transketolase domain protein; KEGG: cau:Caur_1692 transketolase central region. (327 aa)
Cagg_2110PFAM: pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cau:Caur_0952 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein. (578 aa)
Cagg_2636PFAM: 4Fe-4S ferredoxin iron-sulfur binding domain protein; pyruvate ferredoxin/flavodoxin oxidoreductase; pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; 4Fe-4S ferredoxin, iron-sulphur binding, conserved site; KEGG: cau:Caur_2080 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein. (1192 aa)
Cagg_3652PFAM: pyruvate flavodoxin/ferredoxin oxidoreductase domain protein; KEGG: cau:Caur_0249 pyruvate flavodoxin/ferredoxin oxidoreductase domain-containing protein. (605 aa)
Cagg_3767PFAM: Transketolase central region; Transketolase domain protein; KEGG: cau:Caur_3122 transketolase central region. (343 aa)
Your Current Organism:
Chloroflexus aggregans
NCBI taxonomy Id: 326427
Other names: C. aggregans DSM 9485, Chloroflexus aggregans DSM 9485, Chloroflexus aggregans MD-66, Chloroflexus aggregans str. DSM 9485, Chloroflexus aggregans strain DSM 9485
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