STRINGSTRING
potH potH ydcV ydcV glnP glnP YejE YejE YejB YejB ModB ModB CysW CysW CysU CysU TcyB TcyB OppC OppC oppB oppB ProW ProW PotB PotB FbpB FbpB MetP MetP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
potHPutrescine/spermidine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (325 aa)
ydcVPolyamine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (296 aa)
glnPAmino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (249 aa)
YejEPeptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (340 aa)
YejBMicrocin ABC transporter permease; With YejAEF is involved in resistance to microcin C; Derived by automated computational analysis using gene prediction method: Protein Homology. (349 aa)
ModBMolybdenum ABC transporter permease subunit; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (224 aa)
CysWSulfate ABC transporter permease subunit CysW; Derived by automated computational analysis using gene prediction method: Protein Homology. (286 aa)
CysUSulfate ABC transporter permease subunit CysT; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. (278 aa)
TcyBCysteine ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (238 aa)
OppCPeptide ABC transporter permease; With OppABDF is involved in the transport of oligopeptides of up to 5 amino acids into the cell; Derived by automated computational analysis using gene prediction method: Protein Homology. (305 aa)
oppBOligopeptide transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (306 aa)
ProWGlycine/betaine ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (615 aa)
PotBABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (512 aa)
FbpBABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (537 aa)
MetPMethionine ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (228 aa)
Your Current Organism:
Neisseria zoodegmatis
NCBI taxonomy Id: 326523
Other names: ATCC 29859, CDC D5986, DSM 21643, LMG 23012, LMG:23012, N. zoodegmatis, NCTC 12230, Neisseria sp. EF-4b, Neisseria sp. R-24681, Neisseria zoodegmatis Vandamme et al. 2006, strain CL 194/78
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