(27 nodes) Glutathione S-transferase, C-terminal-like, and RIO1 family network (Fusarium oxysporum f. sp. radiciscucumerinum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AU210_016193	Uncharacterized protein. (259 aa)
	AU210_016672	Uncharacterized protein. (277 aa)
	AU210_014962	Uncharacterized protein; Belongs to the GST superfamily. (224 aa)
	AU210_013738	Uncharacterized protein. (203 aa)
	AU210_015355	Uncharacterized protein. (202 aa)
	AU210_014885	Uncharacterized protein; Belongs to the GST superfamily. (216 aa)
	AU210_011747	Uncharacterized protein. (261 aa)
	AU210_013416	Uncharacterized protein; Belongs to the GST superfamily. (220 aa)
	AU210_010448	Uncharacterized protein. (521 aa)
	AU210_010141	Uncharacterized protein; Belongs to the GST superfamily. (227 aa)
	AU210_011985	Uncharacterized protein. (512 aa)
	AU210_009362	Uncharacterized protein. (305 aa)
	AU210_009074	F-box domain-containing protein. (359 aa)
	AU210_007490	Uncharacterized protein; Belongs to the GST superfamily. (230 aa)
	AU210_008826	1-cysPrx_C domain-containing protein. (105 aa)
	AU210_007171	Uncharacterized protein; Belongs to the GST superfamily. (219 aa)
	AU210_003803	Uncharacterized protein; Belongs to the GST superfamily. (222 aa)
	AU210_008380	Uncharacterized protein; Belongs to the GST superfamily. (270 aa)
	AU210_005990	Uncharacterized protein; Belongs to the GST superfamily. (252 aa)
	AU210_006682	Uncharacterized protein. (495 aa)
	AU210_000637	Uncharacterized protein; Belongs to the GST superfamily. (535 aa)
	AU210_005130	Uncharacterized protein. (253 aa)
	AU210_005037	Uncharacterized protein. (149 aa)
	AU210_002486	Uncharacterized protein; Belongs to the GST superfamily. (264 aa)
	AU210_003487	Uncharacterized protein; Belongs to the GST superfamily. (225 aa)
	AU210_001948	Uncharacterized protein; Belongs to the GST superfamily. (241 aa)
	AU210_001840	Uncharacterized protein; Belongs to the GST superfamily. (237 aa)

Your Current Organism:

Fusarium oxysporum f. sp. radiciscucumerinum

NCBI taxonomy Id: 327505
Other names: F. oxysporum f. sp. radicis-cucumerinum, Fusarium oxysporum f. sp. radicis-cucumerinum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AU210_000637	AU210_001948	A0A2H3HTS3	A0A2H3I5K2	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.655
AU210_000637	AU210_002486	A0A2H3HTS3	A0A2H3HZL9	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.517
AU210_000637	AU210_003487	A0A2H3HTS3	A0A2H3I361	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.582
AU210_000637	AU210_003803	A0A2H3HTS3	A0A2H3HFC2	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.821
AU210_000637	AU210_005037	A0A2H3HTS3	A0A2H3HWU5	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.810
AU210_000637	AU210_005130	A0A2H3HTS3	A0A2H3HVP0	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.739
AU210_000637	AU210_005990	A0A2H3HTS3	A0A2H3HLQ7	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.739
AU210_000637	AU210_006682	A0A2H3HTS3	A0A2H3HM07	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.527
AU210_000637	AU210_007171	A0A2H3HTS3	A0A2H3H9T9	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.821
AU210_000637	AU210_007490	A0A2H3HTS3	A0A2H3GW19	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.582
AU210_000637	AU210_008380	A0A2H3HTS3	A0A2H3HHP2	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.804
AU210_000637	AU210_008826	A0A2H3HTS3	A0A2H3H559	Uncharacterized protein; Belongs to the GST superfamily.	1-cysPrx_C domain-containing protein.	0.772
AU210_000637	AU210_009074	A0A2H3HTS3	A0A2H3GRP0	Uncharacterized protein; Belongs to the GST superfamily.	F-box domain-containing protein.	0.526
AU210_000637	AU210_010141	A0A2H3HTS3	A0A2H3GKS8	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.595
AU210_000637	AU210_010448	A0A2H3HTS3	A0A2H3GJD7	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.582
AU210_000637	AU210_011747	A0A2H3HTS3	A0A2H3GGI3	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.772
AU210_000637	AU210_011985	A0A2H3HTS3	A0A2H3GNZ5	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.582
AU210_000637	AU210_013416	A0A2H3HTS3	A0A2H3GHW6	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.595
AU210_000637	AU210_013738	A0A2H3HTS3	A0A2H3G0G2	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein.	0.772
AU210_000637	AU210_014885	A0A2H3HTS3	A0A2H3GCB5	Uncharacterized protein; Belongs to the GST superfamily.	Uncharacterized protein; Belongs to the GST superfamily.	0.655