49 items (Fusarium oxysporum f. sp. radiciscucumerinum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AU210_007675	Uncharacterized protein. (260 aa)
	AU210_013040	DAO domain-containing protein. (408 aa)
	AU210_011572	Uncharacterized protein. (109 aa)
	AU210_010480	Uncharacterized protein. (96 aa)
	AU210_010211	NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (136 aa)
	AU210_012783	HIG1 domain-containing protein. (228 aa)
	AU210_008832	4Fe-4S Mo/W bis-MGD-type domain-containing protein. (968 aa)
	AU210_009415	L51_S25_CI-B8 domain-containing protein. (94 aa)
	AU210_009745	Uncharacterized protein. (188 aa)
	AU210_009836	Rieske domain-containing protein. (551 aa)
	AU210_011571	Uncharacterized protein. (93 aa)
	AU210_008170	Uncharacterized protein. (315 aa)
	AU210_007540	Uncharacterized protein. (1060 aa)
	AU210_008168	Uncharacterized protein. (201 aa)
	AU210_008269	Uncharacterized protein. (197 aa)
	AU210_010230	Uncharacterized protein. (187 aa)
	AU210_005998	Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). (643 aa)
	AU210_006008	Uncharacterized protein. (146 aa)
	AU210_007720	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family. (222 aa)
	AU210_009658	Uncharacterized protein; Belongs to the cytochrome c oxidase subunit 6A family. (127 aa)
	AU210_007642	Cytochrome b-c1 complex subunit 7; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is part of the mitochondrial respiratory chain; Belongs to the UQCRB/QCR7 family. (123 aa)
	AU210_007628	Uncharacterized protein. (104 aa)
	AU210_008062	Uncharacterized protein. (309 aa)
	AU210_006343	Uncharacterized protein. (124 aa)
	AU210_003724	Uncharacterized protein. (110 aa)
	AU210_004325	Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport. (87 aa)
	AU210_004478	Uncharacterized protein; Belongs to the complex I LYR family. (101 aa)
	AU210_006369	zf-CHCC domain-containing protein. (164 aa)
	AU210_004861	Uncharacterized protein. (119 aa)
	AU210_004955	Uncharacterized protein. (89 aa)
	AU210_005107	Uncharacterized protein. (188 aa)
	AU210_002514	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. (486 aa)
	AU210_002688	UCR_hinge domain-containing protein. (94 aa)
	AU210_002416	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family. (221 aa)
	AU210_002527	Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family. (290 aa)
	AU210_002746	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone. (173 aa)
	AU210_003163	Uncharacterized protein. (88 aa)
	AU210_004878	Uncharacterized protein. (215 aa)
	AU210_004986	Uncharacterized protein. (235 aa)
	AU210_003538	Uncharacterized protein. (421 aa)
	AU210_003218	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis. (235 aa)
	AU210_003537	Uncharacterized protein. (198 aa)
	AU210_000262	Uncharacterized protein. (97 aa)
	AU210_000915	Uncharacterized protein. (343 aa)
	AU210_001224	Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family. (468 aa)
	AU210_001599	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit. (182 aa)
	AU210_000743	Uncharacterized protein. (66 aa)
	AU210_001041	Uncharacterized protein. (322 aa)
	AU210_001512	HIG1 domain-containing protein. (231 aa)

Your Current Organism:

Fusarium oxysporum f. sp. radiciscucumerinum

NCBI taxonomy Id: 327505
Other names: F. oxysporum f. sp. radicis-cucumerinum, Fusarium oxysporum f. sp. radicis-cucumerinum

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AU210_000262	AU210_000743	A0A2H3HSY5	A0A2H3I4E1	Uncharacterized protein.	Uncharacterized protein.	0.998
AU210_000262	AU210_000915	A0A2H3HSY5	A0A2H3HTI5	Uncharacterized protein.	Uncharacterized protein.	0.989
AU210_000262	AU210_001041	A0A2H3HSY5	A0A2H3I7D6	Uncharacterized protein.	Uncharacterized protein.	0.973
AU210_000262	AU210_001224	A0A2H3HSY5	A0A2H3HU95	Uncharacterized protein.	Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.	0.960
AU210_000262	AU210_001512	A0A2H3HSY5	A0A2H3I980	Uncharacterized protein.	HIG1 domain-containing protein.	0.596
AU210_000262	AU210_001599	A0A2H3HSY5	A0A2H3I1V4	Uncharacterized protein.	Succinate dehydrogenase [ubiquinone] cytochrome b small subunit.	0.604
AU210_000262	AU210_002416	A0A2H3HSY5	A0A2H3HMD0	Uncharacterized protein.	Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family.	0.894
AU210_000262	AU210_002514	A0A2H3HSY5	A0A2H3HL73	Uncharacterized protein.	NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain.	0.931
AU210_000262	AU210_002527	A0A2H3HSY5	A0A2H3HN89	Uncharacterized protein.	Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.	0.961
AU210_000262	AU210_002688	A0A2H3HSY5	A0A2H3HLS1	Uncharacterized protein.	UCR_hinge domain-containing protein.	0.993
AU210_000262	AU210_002746	A0A2H3HSY5	A0A2H3HNK4	Uncharacterized protein.	NADH-ubiquinone oxidoreductase; Accessory subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I), that is believed not to be involved in catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. The immediate electron acceptor for the enzyme is believed to be ubiquinone.	0.969
AU210_000262	AU210_003163	A0A2H3HSY5	A0A2H3HNL2	Uncharacterized protein.	Uncharacterized protein.	0.963
AU210_000262	AU210_003218	A0A2H3HSY5	A0A2H3HQ85	Uncharacterized protein.	Cytochrome b-c1 complex subunit Rieske, mitochondrial; Component of the ubiquinol-cytochrome c reductase complex (complex III or cytochrome b-c1 complex), which is a respiratory chain that generates an electrochemical potential coupled to ATP synthesis.	0.994
AU210_000262	AU210_003537	A0A2H3HSY5	A0A2H3HRV0	Uncharacterized protein.	Uncharacterized protein.	0.950
AU210_000262	AU210_003538	A0A2H3HSY5	A0A2H3HQ03	Uncharacterized protein.	Uncharacterized protein.	0.950
AU210_000262	AU210_003724	A0A2H3HSY5	A0A2H3HF28	Uncharacterized protein.	Uncharacterized protein.	0.573
AU210_000262	AU210_004325	A0A2H3HSY5	A0A2H3HFS0	Uncharacterized protein.	Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.	0.999
AU210_000262	AU210_004478	A0A2H3HSY5	A0A2H3HFY2	Uncharacterized protein.	Uncharacterized protein; Belongs to the complex I LYR family.	0.984
AU210_000262	AU210_004861	A0A2H3HSY5	A0A2H3HHM3	Uncharacterized protein.	Uncharacterized protein.	0.975
AU210_000262	AU210_004878	A0A2H3HSY5	A0A2H3HP72	Uncharacterized protein.	Uncharacterized protein.	0.958