STRINGSTRING
CFD1 CFD1 AU210_014788 AU210_014788 AU210_001710 AU210_001710 AU210_001121 AU210_001121 AU210_001501 AU210_001501 AU210_001482 AU210_001482 AU210_002645 AU210_002645 AU210_002111 AU210_002111 AU210_002794 AU210_002794 AU210_001224 AU210_001224 AU210_003148 AU210_003148 AU210_004878 AU210_004878 NBP35 NBP35 AU210_003010 AU210_003010 AU210_004499 AU210_004499 AU210_002416 AU210_002416 AU210_002708 AU210_002708 AU210_005861 AU210_005861 AU210_002514 AU210_002514 AU210_005097 AU210_005097 AU210_005173 AU210_005173 AU210_006077 AU210_006077 AU210_006378 AU210_006378 AU210_004084 AU210_004084 AU210_004295 AU210_004295 NTH1 NTH1 AU210_007080 AU210_007080 AU210_008396 AU210_008396 AU210_009471 AU210_009471 AU210_007720 AU210_007720 AU210_006158 AU210_006158 DRE2 DRE2 AU210_008277 AU210_008277 AU210_007732 AU210_007732 AU210_007645 AU210_007645 AU210_007644 AU210_007644 AU210_009667 AU210_009667 AU210_010431 AU210_010431 AU210_009266 AU210_009266 AU210_009236 AU210_009236 AU210_011596 AU210_011596 AU210_008832 AU210_008832 AU210_010940 AU210_010940 AU210_013897 AU210_013897 AU210_013896 AU210_013896
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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CFD1Cytosolic Fe-S cluster assembly factor CFD1; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins; Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP2/CFD1 subfamily. (296 aa)
AU210_014788Radical_SAM domain-containing protein. (823 aa)
AU210_001710Uncharacterized protein. (410 aa)
AU210_001121Fe_hyd_lg_C domain-containing protein; Belongs to the NARF family. (576 aa)
AU210_001501Nfu_N domain-containing protein. (305 aa)
AU210_0014822-(3-amino-3-carboxypropyl)histidine synthase subunit 1; Required for the first step of diphthamide biosynthesis, the transfer of 3-amino-3-carboxypropyl from S-adenosyl-L-methionine to a histidine residue. Diphthamide is a post-translational modification of histidine which occurs in elongation factor 2. (453 aa)
AU210_002645Lipoyl synthase, mitochondrial; Catalyzes the radical-mediated insertion of two sulfur atoms into the C-6 and C-8 positions of the octanoyl moiety bound to the lipoyl domains of lipoate-dependent enzymes, thereby converting the octanoylated domains into lipoylated derivatives. (411 aa)
AU210_002111Uncharacterized protein. (90 aa)
AU210_0027943-isopropylmalate dehydratase; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. (777 aa)
AU210_001224Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family. (468 aa)
AU210_003148Uncharacterized protein. (536 aa)
AU210_004878Uncharacterized protein. (215 aa)
NBP35Cytosolic Fe-S cluster assembly factor NBP35; Component of the cytosolic iron-sulfur (Fe/S) protein assembly (CIA) machinery. Required for maturation of extramitochondrial Fe-S proteins. The NBP35-CFD1 heterotetramer forms a Fe-S scaffold complex, mediating the de novo assembly of an Fe-S cluster and its transfer to target apoproteins; Belongs to the Mrp/NBP35 ATP-binding proteins family. NUBP1/NBP35 subfamily. (342 aa)
AU210_003010Flavodoxin-like domain-containing protein. (729 aa)
AU210_004499Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family. (788 aa)
AU210_002416Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family. (221 aa)
AU210_002708Uncharacterized protein. (1582 aa)
AU210_0058612-(3-amino-3-carboxypropyl)histidine synthase subunit 2; Required for the first step in the synthesis of diphthamide, a post-translational modification of histidine which occurs in translation elongation factor 2; Belongs to the DPH1/DPH2 family. DPH2 subfamily. (536 aa)
AU210_002514NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial; Core subunit of the mitochondrial membrane respiratory chain NADH dehydrogenase (Complex I) that is believed to belong to the minimal assembly required for catalysis. Complex I functions in the transfer of electrons from NADH to the respiratory chain. (486 aa)
AU210_005097DNA primase large subunit; DNA primase is the polymerase that synthesizes small RNA primers for the Okazaki fragments made during discontinuous DNA replication; Belongs to the eukaryotic-type primase large subunit family. (500 aa)
AU210_005173Elongator complex protein 3; Catalytic tRNA acetyltransferase subunit of the RNA polymerase II elongator complex, which is a component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation. (554 aa)
AU210_006077DNA polymerase. (1104 aa)
AU210_006378Elp3 domain-containing protein. (654 aa)
AU210_004084DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2211 aa)
AU210_004295Uncharacterized protein; Belongs to the complex I 75 kDa subunit family. (742 aa)
NTH1Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (395 aa)
AU210_007080ATP-grasp domain-containing protein. (674 aa)
AU210_008396Fe-S_biosyn domain-containing protein. (236 aa)
AU210_009471Uncharacterized protein. (296 aa)
AU210_007720Oxidored_q6 domain-containing protein; Belongs to the complex I 20 kDa subunit family. (222 aa)
AU210_006158Uncharacterized protein. (607 aa)
DRE2Fe-S cluster assembly protein DRE2; Component of the cytosolic iron-sulfur (Fe-S) protein assembly (CIA) machinery required for the maturation of extramitochondrial Fe-S proteins. Part of an electron transfer chain functioning in an early step of cytosolic Fe-S biogenesis, facilitating the de novo assembly of a [4Fe-4S] cluster on the scaffold complex CFD1-NBP35. Electrons are transferred to DRE2 from NADPH via the FAD- and FMN-containing protein TAH18. TAH18-DRE2 are also required for the assembly of the diferric tyrosyl radical cofactor of ribonucleotide reductase (RNR), probably by [...] (331 aa)
AU210_008277Flavodoxin-like domain-containing protein. (1576 aa)
AU210_007732Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family. (809 aa)
AU210_007645Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (622 aa)
AU210_007644SAE2 domain-containing protein. (692 aa)
AU210_009667DNA polymerase. (1694 aa)
AU210_010431Succinate dehydrogenase [ubiquinone] iron-sulfur subunit, mitochondrial; Iron-sulfur protein (IP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q). (278 aa)
AU210_009266Electron transfer flavoprotein-ubiquinone oxidoreductase; Accepts electrons from ETF and reduces ubiquinone. (634 aa)
AU210_009236Rieske domain-containing protein. (1089 aa)
AU210_011596Helicase ATP-binding domain-containing protein. (789 aa)
AU210_0088324Fe-4S Mo/W bis-MGD-type domain-containing protein. (968 aa)
AU210_010940Homoaconitase, mitochondrial; Catalyzes the reversible hydration of cis-homoaconitate to (2R,3S)-homoisocitrate, a step in the alpha-aminoadipate pathway for lysine biosynthesis. (780 aa)
AU210_013897Zn(2)-C6 fungal-type domain-containing protein. (783 aa)
AU210_013896Aconitate hydratase, mitochondrial; Belongs to the aconitase/IPM isomerase family. (808 aa)
Your Current Organism:
Fusarium oxysporum f. sp. radiciscucumerinum
NCBI taxonomy Id: 327505
Other names: F. oxysporum f. sp. radicis-cucumerinum, Fusarium oxysporum f. sp. radicis-cucumerinum
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