14 items (Fusarium oxysporum f. sp. radiciscucumerinum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AU210_005946	Uncharacterized protein. (174 aa)
	AU210_001152	Uncharacterized protein. (216 aa)
	AU210_003233	Uncharacterized protein. (147 aa)
	AU210_002796	Uncharacterized protein. (190 aa)
	AU210_004243	Uncharacterized protein. (1256 aa)
	AU210_002620	Uncharacterized protein. (897 aa)
	AU210_006107	Uncharacterized protein. (189 aa)
	AU210_009287	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family. (627 aa)
	AU210_006715	Uncharacterized protein. (289 aa)
	AU210_006333	Uncharacterized protein. (1406 aa)
	AU210_006123	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (695 aa)
	AU210_009331	Uncharacterized protein. (201 aa)
	AU210_011526	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family. (629 aa)
	cal	Calmodulin; Belongs to the calmodulin family. (149 aa)

Your Current Organism:

Fusarium oxysporum f. sp. radiciscucumerinum

NCBI taxonomy Id: 327505
Other names: F. oxysporum f. sp. radicis-cucumerinum, Fusarium oxysporum f. sp. radicis-cucumerinum

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AU210_002796	AU210_003233	A0A2H3HNR4	A0A2H3HNV1	Uncharacterized protein.	Uncharacterized protein.	0.847
AU210_002796	AU210_005946	A0A2H3HNR4	A0A2H3HBS5	Uncharacterized protein.	Uncharacterized protein.	0.838
AU210_002796	AU210_009287	A0A2H3HNR4	A0A2H3H8A7	Uncharacterized protein.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.470
AU210_002796	cal	A0A2H3HNR4	A0A2C8D2J0	Uncharacterized protein.	Calmodulin; Belongs to the calmodulin family.	0.852
AU210_003233	AU210_002796	A0A2H3HNV1	A0A2H3HNR4	Uncharacterized protein.	Uncharacterized protein.	0.847
AU210_003233	AU210_005946	A0A2H3HNV1	A0A2H3HBS5	Uncharacterized protein.	Uncharacterized protein.	0.857
AU210_003233	AU210_006107	A0A2H3HNV1	A0A2H3HK36	Uncharacterized protein.	Uncharacterized protein.	0.585
AU210_003233	AU210_006715	A0A2H3HNV1	A0A2H3H6E4	Uncharacterized protein.	Uncharacterized protein.	0.863
AU210_003233	AU210_009287	A0A2H3HNV1	A0A2H3H8A7	Uncharacterized protein.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.470
AU210_003233	AU210_009331	A0A2H3HNV1	A0A2H3GSH4	Uncharacterized protein.	Uncharacterized protein.	0.585
AU210_003233	AU210_011526	A0A2H3HNV1	A0A2H3GE91	Uncharacterized protein.	Uncharacterized protein; Belongs to the mitochondrial carrier (TC 2.A.29) family.	0.462
AU210_003233	cal	A0A2H3HNV1	A0A2C8D2J0	Uncharacterized protein.	Calmodulin; Belongs to the calmodulin family.	0.923
AU210_005946	AU210_002796	A0A2H3HBS5	A0A2H3HNR4	Uncharacterized protein.	Uncharacterized protein.	0.838
AU210_005946	AU210_003233	A0A2H3HBS5	A0A2H3HNV1	Uncharacterized protein.	Uncharacterized protein.	0.857
AU210_005946	AU210_006107	A0A2H3HBS5	A0A2H3HK36	Uncharacterized protein.	Uncharacterized protein.	0.408
AU210_005946	AU210_006715	A0A2H3HBS5	A0A2H3H6E4	Uncharacterized protein.	Uncharacterized protein.	0.489
AU210_005946	AU210_009287	A0A2H3HBS5	A0A2H3H8A7	Uncharacterized protein.	Mitochondrial Rho GTPase; Mitochondrial GTPase involved in mitochondrial trafficking. Belongs to the mitochondrial Rho GTPase family.	0.470
AU210_005946	AU210_009331	A0A2H3HBS5	A0A2H3GSH4	Uncharacterized protein.	Uncharacterized protein.	0.408
AU210_005946	cal	A0A2H3HBS5	A0A2C8D2J0	Uncharacterized protein.	Calmodulin; Belongs to the calmodulin family.	0.860
AU210_006107	AU210_003233	A0A2H3HK36	A0A2H3HNV1	Uncharacterized protein.	Uncharacterized protein.	0.585