STRINGSTRING
AU210_001370 AU210_001370 AU210_015618 AU210_015618 AU210_015670 AU210_015670 AU210_016120 AU210_016120 AU210_015701 AU210_015701 AU210_015702 AU210_015702 AU210_016083 AU210_016083 AU210_016059 AU210_016059 AU210_013594 AU210_013594 AU210_011636 AU210_011636 AU210_015129 AU210_015129 AU210_010504 AU210_010504 AU210_010594 AU210_010594 FEN1 FEN1 AU210_010895 AU210_010895 AU210_011539 AU210_011539 AU210_009292 AU210_009292 AU210_009731 AU210_009731 AU210_011498 AU210_011498 AU210_007644 AU210_007644 AU210_008825 AU210_008825 AU210_007645 AU210_007645 AU210_010867 AU210_010867 AU210_010974 AU210_010974 AU210_009195 AU210_009195 AU210_006088 AU210_006088 AU210_009659 AU210_009659 AU210_007846 AU210_007846 AU210_008044 AU210_008044 AU210_003812 AU210_003812 AU210_003891 AU210_003891 AU210_004050 AU210_004050 NTH1 NTH1 AU210_004084 AU210_004084 AU210_004374 AU210_004374 AU210_006077 AU210_006077 AU210_006215 AU210_006215 AU210_002874 AU210_002874 AU210_003077 AU210_003077 AU210_004006 AU210_004006 AU210_002954 AU210_002954 AU210_003248 AU210_003248 AU210_000755 AU210_000755 AU210_000583 AU210_000583 UNG1 UNG1 AU210_004636 AU210_004636 AU210_000228 AU210_000228 AU210_000887 AU210_000887 AU210_001065 AU210_001065 AU210_001439 AU210_001439 AU210_000886 AU210_000886
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AU210_001370UDG domain-containing protein. (319 aa)
AU210_015618WGR domain-containing protein. (246 aa)
AU210_015670Poly [ADP-ribose] polymerase. (567 aa)
AU210_016120PARP alpha-helical domain-containing protein. (936 aa)
AU210_015701Poly [ADP-ribose] polymerase. (621 aa)
AU210_015702Poly [ADP-ribose] polymerase. (416 aa)
AU210_016083Poly [ADP-ribose] polymerase. (540 aa)
AU210_016059Poly [ADP-ribose] polymerase. (592 aa)
AU210_013594Uncharacterized protein. (261 aa)
AU210_011636Uncharacterized protein. (447 aa)
AU210_015129SCP domain-containing protein. (267 aa)
AU210_010504BRCT domain-containing protein. (244 aa)
AU210_010594DNA ligase. (869 aa)
FEN1Flap endonuclease 1; Structure-specific nuclease with 5'-flap endonuclease and 5'- 3' exonuclease activities involved in DNA replication and repair. During DNA replication, cleaves the 5'-overhanging flap structure that is generated by displacement synthesis when DNA polymerase encounters the 5'-end of a downstream Okazaki fragment. It enters the flap from the 5'-end and then tracks to cleave the flap base, leaving a nick for ligation. Also involved in the long patch base excision repair (LP-BER) pathway, by cleaving within the apurinic/apyrimidinic (AP) site- terminated flap. Acts as [...] (353 aa)
AU210_010895Uncharacterized protein. (427 aa)
AU210_011539Uncharacterized protein. (469 aa)
AU210_009292FPG_CAT domain-containing protein. (375 aa)
AU210_009731CMP/dCMP-type deaminase domain-containing protein. (505 aa)
AU210_011498Uncharacterized protein. (794 aa)
AU210_007644SAE2 domain-containing protein. (692 aa)
AU210_008825ENDO3c domain-containing protein. (284 aa)
AU210_007645Adenine DNA glycosylase; Adenine glycosylase active on G-A mispairs. (622 aa)
AU210_010867DNA_binding_1 domain-containing protein. (162 aa)
AU210_010974Fungal_trans domain-containing protein. (641 aa)
AU210_009195ENDO3c domain-containing protein. (486 aa)
AU210_006088Uncharacterized protein. (503 aa)
AU210_009659Endo/exonuclease/phosphatase domain-containing protein. (601 aa)
AU210_007846ENDO3c domain-containing protein. (361 aa)
AU210_008044DNA_pol_E_B domain-containing protein. (775 aa)
AU210_003812Uncharacterized protein. (1262 aa)
AU210_003891Poly [ADP-ribose] polymerase. (747 aa)
AU210_004050Uncharacterized protein. (203 aa)
NTH1Endonuclease III homolog; Bifunctional DNA N-glycosylase with associated apurinic/apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N-glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines. (395 aa)
AU210_004084DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family. (2211 aa)
AU210_004374DNA ligase. (856 aa)
AU210_006077DNA polymerase. (1104 aa)
AU210_006215ENDO3c domain-containing protein. (396 aa)
AU210_002874CBFD_NFYB_HMF domain-containing protein. (177 aa)
AU210_003077Uncharacterized protein. (509 aa)
AU210_004006Uncharacterized protein. (212 aa)
AU210_002954SRP40_C domain-containing protein. (347 aa)
AU210_003248Uncharacterized protein; Belongs to the MT-A70-like family. (337 aa)
AU210_000755CBFD_NFYB_HMF domain-containing protein. (230 aa)
AU210_000583AP_endonuc_2 domain-containing protein. (456 aa)
UNG1Uracil-DNA glycosylase; Excises uracil residues from the DNA which can arise as a result of misincorporation of dUMP residues by DNA polymerase or due to deamination of cytosine. (368 aa)
AU210_004636Uncharacterized protein. (363 aa)
AU210_000228DNA_binding_1 domain-containing protein. (131 aa)
AU210_000887Vezatin domain-containing protein. (617 aa)
AU210_001065Uncharacterized protein. (528 aa)
AU210_001439Peptidyl-prolyl cis-trans isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides; Belongs to the cyclophilin-type PPIase family. (167 aa)
AU210_000886Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family. (259 aa)
Your Current Organism:
Fusarium oxysporum f. sp. radiciscucumerinum
NCBI taxonomy Id: 327505
Other names: F. oxysporum f. sp. radicis-cucumerinum, Fusarium oxysporum f. sp. radicis-cucumerinum
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