STRINGSTRING
OHU97911.1 OHU97911.1 OHU96563.1 OHU96563.1 OHU96564.1 OHU96564.1 OHU96565.1 OHU96565.1 OHU96566.1 OHU96566.1 OHU96567.1 OHU96567.1 OHU94813.1 OHU94813.1 OHU94814.1 OHU94814.1 OHU94822.1 OHU94822.1 OHU94823.1 OHU94823.1 OHU94824.1 OHU94824.1 OHU95102.1 OHU95102.1 OHU94827.1 OHU94827.1 OHU94289.1 OHU94289.1 OHU93473.1 OHU93473.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
OHU97911.1Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (680 aa)
OHU96563.1LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (333 aa)
OHU96564.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (446 aa)
OHU96565.1Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (446 aa)
OHU96566.1Glucose/galactose MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (432 aa)
OHU96567.1Beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (839 aa)
OHU94813.1Transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (337 aa)
OHU94814.1LacI family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (339 aa)
OHU94822.1Glucan 1,4-alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (807 aa)
OHU94823.1MFS transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (497 aa)
OHU94824.1Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (629 aa)
OHU95102.1Alpha-amlyase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the glycosyl hydrolase 13 family. (582 aa)
OHU94827.1Alpha-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (539 aa)
OHU94289.1Fructokinase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the carbohydrate kinase PfkB family. (316 aa)
OHU93473.1Alpha-amylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (668 aa)
Your Current Organism:
Pseudoalteromonas byunsanensis
NCBI taxonomy Id: 327939
Other names: JCM 12483, KCTC 12274, P. byunsanensis, Pseudoalteromonas byunsanensis Park et al. 2005, strain FR1199
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