STRINGSTRING
AM1_0346 AM1_0346 AM1_0388 AM1_0388 AM1_0391 AM1_0391 AM1_0393 AM1_0393 rfbC rfbC rfbA rfbA rfbB rfbB AM1_0407 AM1_0407 rfbD rfbD AM1_1415 AM1_1415 AM1_1891 AM1_1891 AM1_1892 AM1_1892 AM1_1910 AM1_1910 AM1_2021 AM1_2021 AM1_2170 AM1_2170 rfbC-2 rfbC-2 AM1_2191 AM1_2191 AM1_2365 AM1_2365 tuaD tuaD mpg mpg AM1_2709 AM1_2709 AM1_2717 AM1_2717 AM1_2778 AM1_2778 AM1_2807 AM1_2807 AM1_2808 AM1_2808 AM1_2812 AM1_2812 cugP cugP AM1_3519 AM1_3519 AM1_3607 AM1_3607 AM1_3609 AM1_3609 AM1_3626 AM1_3626 fcl fcl AM1_4473 AM1_4473 AM1_4475 AM1_4475 AM1_4547 AM1_4547 AM1_4755 AM1_4755 rmlD rmlD AM1_4836 AM1_4836 AM1_4837 AM1_4837 AM1_4861 AM1_4861 AM1_5478 AM1_5478 galE-2 galE-2 AM1_5726 AM1_5726 AM1_5743 AM1_5743 gmd gmd AM1_5759 AM1_5759 AM1_5762 AM1_5762
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AM1_0346Hypothetical protein. (129 aa)
AM1_0388Hypothetical protein. (390 aa)
AM1_0391Lipopolysaccharide biosynthesis protein, putative. (710 aa)
AM1_0393NAD-dependent epimerase/dehydratase family protein, putative. (323 aa)
rfbCdTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (187 aa)
rfbAGlucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. (293 aa)
rfbBdTDP-glucose 4,6-dehydratase, putative; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. (355 aa)
AM1_0407Lipopolysaccharide biosynthesis protein, putative; Member of chain length determinant protein domain (on N terminal), PF02706, and COG3206, uncharacterized proteins involved in exopolysaccharide biosynthesis. (744 aa)
rfbDdTDP-4-dehydrorhamnose reductase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. (304 aa)
AM1_1415Mannose-6-phosphate isomerase. (130 aa)
AM1_1891Acyltransferase family protein. (336 aa)
AM1_1892Hypothetical protein. (412 aa)
AM1_1910Lipopolysaccharide biosynthesis protein, putative; Member of chain length determinant protein domain on the N terminal, PF02706, and COG0489, ATPases involved in chromosome partitioning. (763 aa)
AM1_2021Polysaccharide export protein. (465 aa)
AM1_2170Phosphoglucomutase/phosphomannomutase family Nucleotidyl transferase. (844 aa)
rfbC-2dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the epimerization of the C3' and C5'positions of dTDP-6-deoxy-D-xylo-4-hexulose, forming dTDP-6-deoxy-L-lyxo-4-hexulose. Belongs to the dTDP-4-dehydrorhamnose 3,5-epimerase family. (185 aa)
AM1_2191NAD dependent epimerase/dehydratase, putative. (305 aa)
AM1_2365dTDP-glucose 4-6-dehydratase, putative. (307 aa)
tuaDUDP-glucose 6-dehydrogenase. (459 aa)
mpgMannose-1-phosphate guanylyltransferase; Catalyzes the formation of UDP-glucose, from UTP and glucose 1-phosphate. (376 aa)
AM1_2709Transferase hexapeptide repeat-containing protein, putative. (175 aa)
AM1_2717Polysaccharide biosynthesis protein, putative. (472 aa)
AM1_2778Acetyltransferase RfbO, CysE/LacA/LpxA/NodL family, putative. (208 aa)
AM1_2807Conserved hypothetical protein. (315 aa)
AM1_2808Chain length determinant protein, putative. (446 aa)
AM1_2812UDP-sulfoquinovose synthase, putative. (387 aa)
cugPNucleotidyl transferase; Catalyzes the formation of UDP-glucose, from UTP and glucose 1-phosphate. (376 aa)
AM1_3519Undecaprenyl-phosphate glucose phosphotransferase, putative. (465 aa)
AM1_3607Glycosyl transferase, group 1 family protein, putative. (419 aa)
AM1_3609NDP-sugar dehydratase or epimerase/NAD binding domain 4, putative. (310 aa)
AM1_3626Capsular polysaccharide biosynthesis protein. (612 aa)
fclNAD-dependent epimerase/dehydratase, putative; Catalyzes the two-step NADP-dependent conversion of GDP-4- dehydro-6-deoxy-D-mannose to GDP-fucose, involving an epimerase and a reductase reaction. (314 aa)
AM1_4473NAD-dependent epimerase/dehydratase family protein, putative. (379 aa)
AM1_4475Aminotransferase, DegT/DnrJ/EryC1/StrS family; Belongs to the DegT/DnrJ/EryC1 family. (391 aa)
AM1_4547Nucleotidyl transferase protein. (323 aa)
AM1_4755Undecaprenyl-phosphate galactosephosphotransferase, putative. (481 aa)
rmlDRmlD substrate binding domain. (299 aa)
AM1_4836Aminotransferase; Member of the DegT/DnrJ/EryC1/StrS aminotransferase superfamily. (406 aa)
AM1_4837Lipopolysaccharide biosynthesis protein, putative. (873 aa)
AM1_4861Conserved hypothetical protein. (779 aa)
AM1_5478Undecaprenyl-phosphate glucose phosphotransferase. (471 aa)
galE-2UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. (330 aa)
AM1_5726Lipopolysaccharide biosynthesis protein, putative. (707 aa)
AM1_5743Mannose-6-phosphate isomerase. (132 aa)
gmdGDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose. (361 aa)
AM1_5759Glycosyl transferase, WecB/TagA/CpsF family protein; Belongs to the glycosyltransferase 26 family. (246 aa)
AM1_5762NAD dependent epimerase/dehydratase protein. (337 aa)
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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