(14 nodes) Mixed, incl. Glycosyltransferase like family 2, and Sulfotransferase family network (Acaryochloris marina)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AM1_2710	Sulfotransferase, putative. (225 aa)
	AM1_2711	Polysaccharide biosynthesis protein, putative. (498 aa)
	AM1_5712	Hypothetical protein. (306 aa)
	AM1_5713	Glycosyl transferase, group 2 family protein. (293 aa)
	AM1_5714	Glycosyl transferase, group 2 family protein. (302 aa)
	AM1_5715	Glycosyl transferase, group 1 family protein. (409 aa)
	AM1_5716	Sulfotransferase. (294 aa)
	AM1_5717	Sulfotransferase. (298 aa)
	AM1_5718	Glycosyl transferase, group 1 family protein, putative. (371 aa)
	AM1_5719	Sulfotransferase. (304 aa)
	AM1_5720	ABC transporter, permease protein. (613 aa)
	AM1_5721	Glycosyl transferase, family 2, putative. (327 aa)
	AM1_5722	Conserved hypothetical protein. (182 aa)
	AM1_5723	Hypothetical protein. (303 aa)

Your Current Organism:

Acaryochloris marina

NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017

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structured XML interaction data, according to the 'PSI-MI' data standard

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node degree of proteins in your network (given the current score cut-off)

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a flat-file format describing the coordinates and colors of nodes in the network

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
AM1_2710	AM1_2711	Sulfotransferase, putative.	Polysaccharide biosynthesis protein, putative.	0.676
AM1_2710	AM1_5717	Sulfotransferase, putative.	Sulfotransferase.	0.704
AM1_2710	AM1_5719	Sulfotransferase, putative.	Sulfotransferase.	0.713
AM1_2711	AM1_2710	Polysaccharide biosynthesis protein, putative.	Sulfotransferase, putative.	0.676
AM1_2711	AM1_5717	Polysaccharide biosynthesis protein, putative.	Sulfotransferase.	0.510
AM1_2711	AM1_5719	Polysaccharide biosynthesis protein, putative.	Sulfotransferase.	0.517
AM1_5712	AM1_5713	Hypothetical protein.	Glycosyl transferase, group 2 family protein.	0.448
AM1_5713	AM1_5712	Glycosyl transferase, group 2 family protein.	Hypothetical protein.	0.448
AM1_5713	AM1_5714	Glycosyl transferase, group 2 family protein.	Glycosyl transferase, group 2 family protein.	0.687
AM1_5713	AM1_5715	Glycosyl transferase, group 2 family protein.	Glycosyl transferase, group 1 family protein.	0.700
AM1_5713	AM1_5716	Glycosyl transferase, group 2 family protein.	Sulfotransferase.	0.490
AM1_5714	AM1_5713	Glycosyl transferase, group 2 family protein.	Glycosyl transferase, group 2 family protein.	0.687
AM1_5714	AM1_5715	Glycosyl transferase, group 2 family protein.	Glycosyl transferase, group 1 family protein.	0.765
AM1_5714	AM1_5716	Glycosyl transferase, group 2 family protein.	Sulfotransferase.	0.613
AM1_5714	AM1_5717	Glycosyl transferase, group 2 family protein.	Sulfotransferase.	0.544
AM1_5714	AM1_5719	Glycosyl transferase, group 2 family protein.	Sulfotransferase.	0.415
AM1_5715	AM1_5713	Glycosyl transferase, group 1 family protein.	Glycosyl transferase, group 2 family protein.	0.700
AM1_5715	AM1_5714	Glycosyl transferase, group 1 family protein.	Glycosyl transferase, group 2 family protein.	0.765
AM1_5715	AM1_5716	Glycosyl transferase, group 1 family protein.	Sulfotransferase.	0.558
AM1_5715	AM1_5717	Glycosyl transferase, group 1 family protein.	Sulfotransferase.	0.486