STRINGSTRING
speA speA speB speB speE-2 speE-2 speB-2 speB-2 AM1_4201 AM1_4201
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
speAArginine decarboxylase; Catalyzes the biosynthesis of agmatine from arginine. (674 aa)
speBAgmatinase, putative; Belongs to the arginase family. (398 aa)
speE-2Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine. (316 aa)
speB-2Agmatinase, putative; Belongs to the arginase family. (339 aa)
AM1_4201Porphyromonas-type peptidyl-arginine deiminase, putative; Belongs to the agmatine deiminase family. (373 aa)
Your Current Organism:
Acaryochloris marina
NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017
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