(4 nodes) PBS lyase HEAT-like repeat network (Acaryochloris marina)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	nblB	PBS lyase HEAT-like repeat (COG1413) family protein. (221 aa)
	AM1_2319	PBS lyase HEAT-like repeat (COG1413) protein region. (252 aa)
	AM1_2983	PBS lyase HEAT-like repeat protein, CpcE-like protein. (395 aa)
	AM1_3796	Peptidase M1, membrane alanine aminopeptidase; Peptidase M1 and conserved PBS lyase HEAT-like repeat protein. (868 aa)

Your Current Organism:

Acaryochloris marina

NCBI taxonomy Id: 329726
Other names: A. marina MBIC11017, Acaryochloris marina MBIC11017

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AM1_2319	AM1_2983	AM1_2319	AM1_2983	PBS lyase HEAT-like repeat (COG1413) protein region.	PBS lyase HEAT-like repeat protein, CpcE-like protein.	0.631
AM1_2319	nblB	AM1_2319	AM1_0043	PBS lyase HEAT-like repeat (COG1413) protein region.	PBS lyase HEAT-like repeat (COG1413) family protein.	0.711
AM1_2983	AM1_2319	AM1_2983	AM1_2319	PBS lyase HEAT-like repeat protein, CpcE-like protein.	PBS lyase HEAT-like repeat (COG1413) protein region.	0.631
AM1_2983	AM1_3796	AM1_2983	AM1_3796	PBS lyase HEAT-like repeat protein, CpcE-like protein.	Peptidase M1, membrane alanine aminopeptidase; Peptidase M1 and conserved PBS lyase HEAT-like repeat protein.	0.415
AM1_2983	nblB	AM1_2983	AM1_0043	PBS lyase HEAT-like repeat protein, CpcE-like protein.	PBS lyase HEAT-like repeat (COG1413) family protein.	0.659
AM1_3796	AM1_2983	AM1_3796	AM1_2983	Peptidase M1, membrane alanine aminopeptidase; Peptidase M1 and conserved PBS lyase HEAT-like repeat protein.	PBS lyase HEAT-like repeat protein, CpcE-like protein.	0.415
nblB	AM1_2319	AM1_0043	AM1_2319	PBS lyase HEAT-like repeat (COG1413) family protein.	PBS lyase HEAT-like repeat (COG1413) protein region.	0.711
nblB	AM1_2983	AM1_0043	AM1_2983	PBS lyase HEAT-like repeat (COG1413) family protein.	PBS lyase HEAT-like repeat protein, CpcE-like protein.	0.659