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gdhA gdhA glnA glnA nirA nirA narK narK NIDE2482 NIDE2482 NIDE2534 NIDE2534 NIDE2767 NIDE2767 nxrB1 nxrB1 nxrA1 nxrA1 nxrA2 nxrA2 NIDE3339 NIDE3339 gltD gltD gltB gltB NIDE4138 NIDE4138 nirK nirK
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
gdhAGlutamate dehydrogenase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the Glu/Leu/Phe/Val dehydrogenases family. (419 aa)
glnAGlutamine synthetase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (469 aa)
nirAFerredoxin-nitrite reductase; Function of strongly homologous gene; enzyme; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family. (531 aa)
narKNitrate transporter; Function of strongly homologous gene; transporter. (413 aa)
NIDE2482Dioxygenase, ferredoxin subunit; Function of strongly homologous gene; carrier. (101 aa)
NIDE2534Putative Copper-containing nitrite reductase (NO-forming); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; enzyme. (323 aa)
NIDE2767Putative Rieske-type ferredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (108 aa)
nxrB1Putative Nitrate oxidoreductase, beta subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (429 aa)
nxrA1Putative Nitrate oxidoreductase, alpha subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1146 aa)
nxrA2Putative Nitrate oxidoreductase, alpha subunit; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. (1147 aa)
NIDE3339Putative Cytochrome c-type protein; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (234 aa)
gltDGlutamate synthase, beta subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (477 aa)
gltBGlutamate synthase, alpha subunit; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (1506 aa)
NIDE4138Putative 2Fe-2S ferredoxin; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative carrier. (105 aa)
nirKCopper-containing nitrite reductase; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (321 aa)
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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