STRINGSTRING
NIDE3836 NIDE3836 NIDE3941 NIDE3941 NIDE4240 NIDE4240 NIDE4243 NIDE4243 NIDE4272 NIDE4272 NIDE3462 NIDE3462 NIDE3050 NIDE3050 NIDE3052 NIDE3052 NIDE3092 NIDE3092 NIDE3244 NIDE3244 NIDE3284 NIDE3284 NIDE3414 NIDE3414 NIDE3415 NIDE3415 NIDE1772 NIDE1772 NIDE1587 NIDE1587 NIDE1491 NIDE1491 NIDE1222 NIDE1222 NIDE1123 NIDE1123 NIDE1109 NIDE1109 NIDE1046 NIDE1046 NIDE0936 NIDE0936 NIDE0857 NIDE0857 NIDE0815 NIDE0815 NIDE0807 NIDE0807 NIDE3570 NIDE3570 NIDE3587 NIDE3587 NIDE3593 NIDE3593 NIDE0805 NIDE0805 NIDE0778 NIDE0778 NIDE2070 NIDE2070 NIDE2283 NIDE2283 NIDE2323 NIDE2323 cheM cheM NIDE2522 NIDE2522 NIDE1908 NIDE1908 NIDE0585 NIDE0585 NIDE0584 NIDE0584 NIDE0578 NIDE0578 NIDE0545 NIDE0545 NIDE0542 NIDE0542 NIDE0241 NIDE0241
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NIDE3836Putative Sensory transcriptional regulator, LuxR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (235 aa)
NIDE3941Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (892 aa)
NIDE4240Putative Hybrid sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1314 aa)
NIDE4243Protein of unknown function; No homology to any previously reported sequences. (136 aa)
NIDE4272Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (465 aa)
NIDE3462Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (924 aa)
NIDE3050Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (915 aa)
NIDE3052Putative Hybrid sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (809 aa)
NIDE3092Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1051 aa)
NIDE3244Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (651 aa)
NIDE3284Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1058 aa)
NIDE3414Putative Sensory response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (331 aa)
NIDE3415Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (590 aa)
NIDE1772Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (657 aa)
NIDE1587Protein of unknown function, putative Sensory histidine kinase with methyltransferase region; No homology to any previously reported sequences; 11369279, 11489844, 15009198, 16176121, 16622408, 18076326, 7699720, 9301332, 9382818. (1396 aa)
NIDE1491Putative Hybrid sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (998 aa)
NIDE1222Sensor histidine kinase; Function of strongly homologous gene; enzyme. (765 aa)
NIDE1123Putative Response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (253 aa)
NIDE1109Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (768 aa)
NIDE1046Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1340 aa)
NIDE0936Putative Sonsor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (470 aa)
NIDE0857Putative Phosphate regulon sensor histidine kinase PhoR; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (619 aa)
NIDE0815Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1431 aa)
NIDE0807Putative Histidine kinase, containing PAS domain S-box; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (578 aa)
NIDE3570Putative Hybrid sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1033 aa)
NIDE3587Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (830 aa)
NIDE3593Putative Hybrid sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (786 aa)
NIDE0805Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1210 aa)
NIDE0778Putative Sensor protein PilS; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (619 aa)
NIDE2070Protein of unknown function, putative Response regulator with PAS domain S-box; No homology to any previously reported sequences; 14982921, 15009198, 16176121, 18076326, 7699720, 9301332, 9382818. (514 aa)
NIDE2283Putative Sensor histidine kinase FleS; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (429 aa)
NIDE2323Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (950 aa)
cheMGlobin-coupled methyl-accepting chemotaxis protein (modular protein); Function of strongly homologous gene; regulator. (772 aa)
NIDE2522Sensory response regulator with diguanylate cyclase domain; Function of strongly homologous gene; regulator. (708 aa)
NIDE1908Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1013 aa)
NIDE0585Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1610 aa)
NIDE0584Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (954 aa)
NIDE0578Protein of unknown function, putative Sensor histidine kinase; No homology to any previously reported sequences; 18076326. (1332 aa)
NIDE0545Protein of unknown function, S-box protein; No homology to any previously reported sequences; 15009198, 9301332. (1040 aa)
NIDE0542Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences. (910 aa)
NIDE0241Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (532 aa)
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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