STRINGSTRING
NIDE0165 NIDE0165 NIDE0222 NIDE0222 NIDE0223 NIDE0223 NIDE0240 NIDE0240 cztR cztR NIDE0390 NIDE0390 NIDE0542 NIDE0542 NIDE0545 NIDE0545 NIDE0557 NIDE0557 NIDE0579 NIDE0579 NIDE0580 NIDE0580 NIDE0581 NIDE0581 NIDE0584 NIDE0584 NIDE0585 NIDE0585 NIDE0586 NIDE0586 NIDE0686 NIDE0686 NIDE0687 NIDE0687 pilR pilR NIDE0804 NIDE0804 NIDE0805 NIDE0805 NIDE0815 NIDE0815 NIDE0816 NIDE0816 NIDE0858 NIDE0858 NIDE0935 NIDE0935 NIDE1040 NIDE1040 NIDE1046 NIDE1046 NIDE1047 NIDE1047 NIDE1110 NIDE1110 NIDE1120 NIDE1120 NIDE1123 NIDE1123 NIDE1164 NIDE1164 NIDE1165 NIDE1165 NIDE1223 NIDE1223 NIDE1227 NIDE1227 NIDE1228 NIDE1228 NIDE1229 NIDE1229 NIDE1256 NIDE1256 NIDE1261 NIDE1261 NIDE1484 NIDE1484 gacA gacA NIDE1491 NIDE1491 NIDE1492 NIDE1492 cusR cusR NIDE1584 NIDE1584 NIDE1585 NIDE1585 NIDE1587 NIDE1587 NIDE1688 NIDE1688 NIDE1735 NIDE1735 NIDE1763 NIDE1763 NIDE1773 NIDE1773 NIDE1858 NIDE1858 NIDE1859 NIDE1859 NIDE1870 NIDE1870 NIDE1908 NIDE1908 NIDE2020 NIDE2020 NIDE2070 NIDE2070 NIDE2119 NIDE2119 NIDE2267 NIDE2267 fleQ fleQ fleR fleR NIDE2290 NIDE2290 NIDE2323 NIDE2323 cheY cheY cheV cheV cheB cheB cheY-2 cheY-2 cheB-2 cheB-2 NIDE2370 NIDE2370 NIDE2372 NIDE2372 NIDE2412 NIDE2412 phoB phoB NIDE2522 NIDE2522 NIDE2651 NIDE2651 NIDE2654 NIDE2654 NIDE2657 NIDE2657 NIDE2716 NIDE2716 NIDE2816 NIDE2816 NIDE3051 NIDE3051 NIDE3052 NIDE3052 NIDE3088 NIDE3088 NIDE3091 NIDE3091 NIDE3163 NIDE3163 NIDE3228 NIDE3228 NIDE3245 NIDE3245 NIDE3247 NIDE3247 NIDE3254 NIDE3254 NIDE3283 NIDE3283 NIDE3387 NIDE3387 NIDE3414 NIDE3414 NIDE3461 NIDE3461 NIDE3520 NIDE3520 NIDE3536 NIDE3536 NIDE3570 NIDE3570 NIDE3585 NIDE3585 NIDE3593 NIDE3593 NIDE3607 NIDE3607 NIDE3753 NIDE3753 NIDE3940 NIDE3940 NIDE3942 NIDE3942 NIDE3963 NIDE3963 NIDE3982 NIDE3982 NIDE4086 NIDE4086 NIDE4197 NIDE4197 NIDE4240 NIDE4240 NIDE4271 NIDE4271
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NIDE0165Transcriptional regulator, LuxR family; Function of strongly homologous gene; regulator. (223 aa)
NIDE0222Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (545 aa)
NIDE0223Signal transduction response regulator, receiver domain; Function of strongly homologous gene; regulator. (153 aa)
NIDE0240Signal transduction response regulator, receiver domain; Function of strongly homologous gene; regulator. (123 aa)
cztRHeavy metal response regulator; Function of strongly homologous gene; regulator. (223 aa)
NIDE0390Putative Signal transduction response regulator, receiver and diguanylate cyclase domain (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (310 aa)
NIDE0542Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences. (910 aa)
NIDE0545Protein of unknown function, S-box protein; No homology to any previously reported sequences; 15009198, 9301332. (1040 aa)
NIDE0557Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences. (949 aa)
NIDE0579Transcriptional regulator, LuxR family; Function of strongly homologous gene; regulator. (212 aa)
NIDE0580Transcriptional regulator, LuxR family; Function of strongly homologous gene; regulator. (226 aa)
NIDE0581Response regulator, CheY-like; Function of strongly homologous gene; factor. (127 aa)
NIDE0584Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (954 aa)
NIDE0585Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1610 aa)
NIDE0586Transcriptional regulator, LuxR family; Function of strongly homologous gene; regulator. (218 aa)
NIDE0686Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences. (922 aa)
NIDE0687Response regulator with HD-GYP domain; Function of strongly homologous gene; regulator. (357 aa)
pilRTranscriptional regulatory protein pilR; Function of strongly homologous gene; regulator. (459 aa)
NIDE0804Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (415 aa)
NIDE0805Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1210 aa)
NIDE0815Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1431 aa)
NIDE0816Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (945 aa)
NIDE0858Putative Phosphate regulon transcriptional regulatory protein phoB; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (238 aa)
NIDE0935Response regulator, LuxR family; Function of strongly homologous gene; regulator. (216 aa)
NIDE1040Response regulator, LuxR family; Function of strongly homologous gene; regulator. (234 aa)
NIDE1046Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1340 aa)
NIDE1047Sigma-54 dependent DNA-binding response regulator; Function of strongly homologous gene; regulator. (464 aa)
NIDE1110Response regulator, LuxR family; Function of strongly homologous gene; regulator. (214 aa)
NIDE1120Sigma-54 dependent DNA-binding response regulator; Function of strongly homologous gene; regulator. (461 aa)
NIDE1123Putative Response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative factor. (253 aa)
NIDE1164Response regulator, LuxR family; Function of strongly homologous gene; regulator. (214 aa)
NIDE1165Putative Response regulator (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; regulator. (139 aa)
NIDE1223Sigma-54 dependent DNA-binding response regulator; Function of strongly homologous gene; regulator. (466 aa)
NIDE1227Histidine kinase; Function of strongly homologous gene; enzyme. (589 aa)
NIDE1228Response regulator, contains GGDEF domain; Function of strongly homologous gene; regulator. (334 aa)
NIDE1229Response regulator; Function of strongly homologous gene; regulator. (215 aa)
NIDE1256Sigma-54 dependent DNA-binding response regulator; Function of strongly homologous gene; regulator. (464 aa)
NIDE1261Putative Response Regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (164 aa)
NIDE1484Putative Response regulator, LuxR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (249 aa)
gacAResponse regulator, LuxR family; Function of homologous gene experimentally demonstrated in an other organism; regulator. (214 aa)
NIDE1491Putative Hybrid sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (998 aa)
NIDE1492CheY-like response regulator; Function of strongly homologous gene; regulator. (153 aa)
cusRTranscriptional regulatory protein CusR; Function of strongly homologous gene; regulator. (227 aa)
NIDE1584Putative Response regulator with HD domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (380 aa)
NIDE1585Sigma-54 dependent transcriptional regulator; Function of strongly homologous gene; regulator. (470 aa)
NIDE1587Protein of unknown function, putative Sensory histidine kinase with methyltransferase region; No homology to any previously reported sequences; 11369279, 11489844, 15009198, 16176121, 16622408, 18076326, 7699720, 9301332, 9382818. (1396 aa)
NIDE1688DNA-binding response regulator, CheY like; Function of strongly homologous gene; regulator. (142 aa)
NIDE1735Putative Response regulator, CheY like (modular protein); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (388 aa)
NIDE1763Response regulator, CheY like; Function of strongly homologous gene; regulator. (121 aa)
NIDE1773Sigma-54 dependent transcriptional regulator; Function of strongly homologous gene; regulator. (468 aa)
NIDE1858Putative Response regulator, CheY-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (211 aa)
NIDE1859Membrane protein of unknown function, putative Response regulator with Hpt domain; No homology to any previously reported sequences; 11406410, 11489844, 11934609, 14636076, 1482126, 16176121, 18076326, 7699720. (381 aa)
NIDE1870Response regulator with HD-GYP domain; Function of strongly homologous gene; regulator. (392 aa)
NIDE1908Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1013 aa)
NIDE2020Sigma-54 dependent transcriptional regulator; Function of strongly homologous gene; regulator. (448 aa)
NIDE2070Protein of unknown function, putative Response regulator with PAS domain S-box; No homology to any previously reported sequences; 14982921, 15009198, 16176121, 18076326, 7699720, 9301332, 9382818. (514 aa)
NIDE2119Putative Histidine kinase with protein phosphatase region; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (563 aa)
NIDE2267Sigma-54 dependent DNA-binding response regulator; Function of strongly homologous gene; putative regulator. (471 aa)
fleQSigma-54 dependent response regulator FleQ; Function of strongly homologous gene; regulator. (471 aa)
fleRSigma-54 dependent response regulator FleR; Function of strongly homologous gene; regulator. (472 aa)
NIDE2290Two-component system, NtrC family, nitrogen regulation response regulator NtrX; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (349 aa)
NIDE2323Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (950 aa)
cheYChemotaxis regulator CheY; Function of homologous gene experimentally demonstrated in an other organism; regulator. (120 aa)
cheVChemotaxis signal transducer CheV; Function of strongly homologous gene; regulator. (327 aa)
cheBChemotaxis methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (365 aa)
cheY-2Chemotaxis regulator CheY; Function of homologous gene experimentally demonstrated in an other organism; regulator. (123 aa)
cheB-2Chemotaxis methylesterase CheB; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family. (349 aa)
NIDE2370Putative Response regulator receiver modulated Serine phosphatase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (421 aa)
NIDE2372Putative Response regulator with ATPase domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (299 aa)
NIDE2412Signal transduction response regulator; Function of strongly homologous gene; regulator. (240 aa)
phoBPhosphate regulon transcriptional regulator PhoB; Function of strongly homologous gene; regulator. (234 aa)
NIDE2522Sensory response regulator with diguanylate cyclase domain; Function of strongly homologous gene; regulator. (708 aa)
NIDE2651Putative Response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (496 aa)
NIDE2654Chemosensory pili system protein ChpA (sensor histidine kinase/response regulator); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1129 aa)
NIDE2657Putative Chemotaxis regulator CheY; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (120 aa)
NIDE2716Putative Response regulator, LuxR family; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (235 aa)
NIDE2816Response regulator, CheY-like; Function of strongly homologous gene; regulator. (394 aa)
NIDE3051CheY-like response regulator; Function of strongly homologous gene; regulator. (146 aa)
NIDE3052Putative Hybrid sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (809 aa)
NIDE3088Sigma-54 dependent transcriptional regulator; Function of strongly homologous gene; regulator. (470 aa)
NIDE3091Response regulator, LuxR family; Function of strongly homologous gene; regulator. (215 aa)
NIDE3163Sigma-54 dependent response regulator; Function of strongly homologous gene; regulator. (456 aa)
NIDE3228Putative Response regulator, CheY-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (146 aa)
NIDE3245Sigma-54 dependent transcriptional regulator; Function of strongly homologous gene; regulator. (463 aa)
NIDE3247Response regulator, LuxR family; Function of strongly homologous gene; regulator. (214 aa)
NIDE3254Sigma-54 dependent transcriptional regulator; Function of strongly homologous gene; regulator. (473 aa)
NIDE3283Sigma-54 dependent transcriptional regulator; Function of strongly homologous gene; regulator. (483 aa)
NIDE3387Sigma-54 dependent transcriptional regulator; Function of strongly homologous gene; regulator. (458 aa)
NIDE3414Putative Sensory response regulator; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (331 aa)
NIDE3461Protein of unknown function, putative CheY-like response regulator; No homology to any previously reported sequences; 11934609, 14636076, 16176121, 18076326, 7699720. (250 aa)
NIDE3520Sigma-54 dependent response regulator; Function of strongly homologous gene; regulator. (473 aa)
NIDE3536Putative Response regulator, CheY-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (146 aa)
NIDE3570Putative Hybrid sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1033 aa)
NIDE3585Putative Response regulator, CheY-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (144 aa)
NIDE3593Putative Hybrid sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (786 aa)
NIDE3607Response regulator with ATPase domain; Function of strongly homologous gene; regulator. (307 aa)
NIDE3753Hybrid sensor histidine kinase; Function of strongly homologous gene; enzyme. (504 aa)
NIDE3940Putative Response regulator, CheY-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (149 aa)
NIDE3942Sigma-54 dependent response regulator; Function of strongly homologous gene; regulator. (459 aa)
NIDE3963Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (620 aa)
NIDE3982Response regulator, LuxR family; Function of strongly homologous gene; regulator. (214 aa)
NIDE4086Putative Response regulator, CheY-like; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (276 aa)
NIDE4197Putative CheY-like response regulator modulated diguanylate cyclase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (324 aa)
NIDE4240Putative Hybrid sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1314 aa)
NIDE4271Sigma-54 dependent response regulator; Function of strongly homologous gene; regulator. (452 aa)
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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