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NIDE0543 NIDE0543 fhlA fhlA NIDE0542 NIDE0542 NIDE1354 NIDE1354 nifA nifA gspE2 gspE2 NIDE1772 NIDE1772 NIDE2021 NIDE2021 NIDE2048 NIDE2048 NIDE2629 NIDE2629 NIDE2724 NIDE2724 NIDE3052 NIDE3052 nifA-2 nifA-2 NIDE3319 NIDE3319 NIDE3498 NIDE3498 NIDE3570 NIDE3570 NIDE4240 NIDE4240 NIDE0557 NIDE0557 NIDE0578 NIDE0578 NIDE0686 NIDE0686 NIDE0694 NIDE0694 NIDE0805 NIDE0805 NIDE0815 NIDE0815 NIDE0964 NIDE0964 NIDE1046 NIDE1046
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
NIDE0543Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences. (771 aa)
fhlAFormate hydrogenlyase transcriptional activator; Function of strongly homologous gene; regulator. (693 aa)
NIDE0542Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences. (910 aa)
NIDE1354Conserved protein of unknown function, contains GAF and ANTAR domain; Homologs of previously reported genes of unknown function; 11032796, 11796212, 12271124, 15341725, 9433123. (419 aa)
nifASigma-54 dependent transcriptional regulator NifA; Function of strongly homologous gene; regulator. (517 aa)
gspE2General secretion pathway protein E, contains GAF domain; Function of strongly homologous gene; transporter. (770 aa)
NIDE1772Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (657 aa)
NIDE2021Putative Histidine kinase, contains GAF domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (438 aa)
NIDE2048Protein of unknown function, contains GAF domain; No homology to any previously reported sequences; 9433123. (357 aa)
NIDE2629Putative Histidine kinase, contains GAF domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (687 aa)
NIDE2724Conserved protein of unknown function, contains GAF domain; Homologs of previously reported genes of unknown function; 12271124, 15708973, 9433123. (488 aa)
NIDE3052Putative Hybrid sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (809 aa)
nifA-2Nif-specific regulatory protein NifA; Function of strongly homologous gene; regulator. (506 aa)
NIDE3319Sigma-54 dependent transcriptional regulator; Function of strongly homologous gene; regulator. (680 aa)
NIDE3498Sigma-54 dependent transcriptional regulator (modular protein); Function of strongly homologous gene; regulator. (866 aa)
NIDE3570Putative Hybrid sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1033 aa)
NIDE4240Putative Hybrid sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1314 aa)
NIDE0557Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences. (949 aa)
NIDE0578Protein of unknown function, putative Sensor histidine kinase; No homology to any previously reported sequences; 18076326. (1332 aa)
NIDE0686Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences. (922 aa)
NIDE0694Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences. (610 aa)
NIDE0805Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1210 aa)
NIDE0815Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1431 aa)
NIDE0964Putative Histidine kinase, contains GAF domain; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1002 aa)
NIDE1046Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1340 aa)
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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