19 items (Nitrospira defluvii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	NIDE1046	Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1340 aa)
	NIDE0815	Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1431 aa)
	NIDE0936	Putative Sonsor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (470 aa)
	NIDE0241	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (532 aa)
	NIDE0542	Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences. (910 aa)
	NIDE0545	Protein of unknown function, S-box protein; No homology to any previously reported sequences; 15009198, 9301332. (1040 aa)
	NIDE1109	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (768 aa)
	NIDE1491	Putative Hybrid sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator. (998 aa)
	NIDE1908	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1013 aa)
	NIDE2070	Protein of unknown function, putative Response regulator with PAS domain S-box; No homology to any previously reported sequences; 14982921, 15009198, 16176121, 18076326, 7699720, 9301332, 9382818. (514 aa)
	NIDE0578	Protein of unknown function, putative Sensor histidine kinase; No homology to any previously reported sequences; 18076326. (1332 aa)
	NIDE2323	Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (950 aa)
	NIDE3050	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (915 aa)
	NIDE3092	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1051 aa)
	NIDE3284	Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1058 aa)
	NIDE3462	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (924 aa)
	NIDE3941	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (892 aa)
	NIDE4240	Putative Hybrid sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (1314 aa)
	NIDE4272	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (465 aa)

Your Current Organism:

Nitrospira defluvii

NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17

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Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
NIDE0241	NIDE0542	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences.	0.835
NIDE0241	NIDE0545	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Protein of unknown function, S-box protein; No homology to any previously reported sequences; 15009198, 9301332.	0.581
NIDE0241	NIDE0578	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Protein of unknown function, putative Sensor histidine kinase; No homology to any previously reported sequences; 18076326.	0.507
NIDE0241	NIDE0815	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.564
NIDE0241	NIDE1046	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.467
NIDE0241	NIDE1491	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative Hybrid sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative regulator.	0.481
NIDE0241	NIDE1908	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.557
NIDE0241	NIDE2070	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Protein of unknown function, putative Response regulator with PAS domain S-box; No homology to any previously reported sequences; 14982921, 15009198, 16176121, 18076326, 7699720, 9301332, 9382818.	0.662
NIDE0241	NIDE2323	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.542
NIDE0241	NIDE3284	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative Histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.512
NIDE0241	NIDE3462	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.447
NIDE0241	NIDE3941	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.451
NIDE0241	NIDE4240	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	Putative Hybrid sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.596
NIDE0542	NIDE0241	Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences.	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.835
NIDE0542	NIDE0545	Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences.	Protein of unknown function, S-box protein; No homology to any previously reported sequences; 15009198, 9301332.	0.761
NIDE0542	NIDE0578	Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences.	Protein of unknown function, putative Sensor histidine kinase; No homology to any previously reported sequences; 18076326.	0.914
NIDE0542	NIDE0815	Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences.	Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.978
NIDE0542	NIDE0936	Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences.	Putative Sonsor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.672
NIDE0542	NIDE1046	Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences.	Putative Hybrid histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.976
NIDE0542	NIDE1109	Protein of unknown function, putative Histidine kinase; No homology to any previously reported sequences.	Putative Sensor histidine kinase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme.	0.691