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ilvE ilvE NIDE1138 NIDE1138 lpd lpd NIDE3103 NIDE3103 fadA fadA NIDE3109 NIDE3109 NIDE3114 NIDE3114 atoB atoB scpAa scpAa scpAb scpAb pccB pccB NIDE3122 NIDE3122 mvaB mvaB NIDE3737 NIDE3737 NIDE3844 NIDE3844 NIDE4061 NIDE4061 NIDE4062 NIDE4062 garR garR NIDE4352 NIDE4352
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
ilvEBranched-chain amino acid aminotransferase; Acts on leucine, isoleucine and valine. Belongs to the class-IV pyridoxal-phosphate-dependent aminotransferase family. (304 aa)
NIDE1138Putative 3-hydroxyisobutyrate dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (299 aa)
lpdDihydrolipoyl dehydrogenase, E3 component of Pyruvate and 2-oxoglutarate dehydrogenase complexes; Function of homologous gene experimentally demonstrated in an other organism; enzyme. (473 aa)
NIDE3103Putative 3-hydroxyacyl-CoA dehydrogenase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (407 aa)
fadA3-ketoacyl-CoA thiolase; Function of strongly homologous gene; enzyme; Belongs to the thiolase-like superfamily. Thiolase family. (396 aa)
NIDE3109Putative 4-hydroxyphenylpyruvate dioxygenase (fragment); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (198 aa)
NIDE3114Putative 2-oxoisovalerate dehydrogenase, beta subunit (Transketolase); Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (330 aa)
atoBAcetyl-CoA acetyltransferase; Function of homologous gene experimentally demonstrated in an other organism; enzyme; Belongs to the thiolase-like superfamily. Thiolase family. (394 aa)
scpAaMethylmalonyl-CoA mutase (N-terminal fragment); Function of strongly homologous gene; enzyme. (531 aa)
scpAbMethylmalonyl-CoA mutase (C-terminal fragment); Function of strongly homologous gene; enzyme. (135 aa)
pccBPropionyl-CoA carboxylase; Function of strongly homologous gene; enzyme. (537 aa)
NIDE3122Putative Enoyl-CoA hydratase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (282 aa)
mvaBHydroxymethylglutaryl-CoA lyase; Function of strongly homologous gene; enzyme. (315 aa)
NIDE3737Putative Aminodeoxychorismate lyase; Function proposed based on presence of conserved amino acid motif, structural feature or limited homology; putative enzyme. (293 aa)
NIDE3844Protein of unknown function; No homology to any previously reported sequences. (166 aa)
NIDE4061Protein of unknown function; No homology to any previously reported sequences. (190 aa)
NIDE4062Aldehyde dehydrogenase; Function of strongly homologous gene; enzyme; Belongs to the aldehyde dehydrogenase family. (518 aa)
garR2-hydroxy-3-oxopropionate reductase; Function of strongly homologous gene; enzyme. (316 aa)
NIDE43523-hydroxyacid dehydrogenase; Function of strongly homologous gene; enzyme. (289 aa)
Your Current Organism:
Nitrospira defluvii
NCBI taxonomy Id: 330214
Other names: Candidatus Nitrospira defluvii, LMG 27402, LMG:27402, N. defluvii, NCIMB 14950, strain A17
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