16 items (Parvimonas micra) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	AIZ36288.1	ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)
	AIZ36289.1	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family. (660 aa)
	AIZ36290.1	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase proteolipid subunit family. (140 aa)
	AIZ36291.1	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (102 aa)
	AIZ36292.1	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (200 aa)
	atpA	ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (591 aa)
	atpB	ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. (456 aa)
	atpD	ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane. (205 aa)
	atpD-2	ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane. (211 aa)
	atpB-2	ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. (458 aa)
	atpA-2	ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (589 aa)
	atpF	ATP synthase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane. (102 aa)
	AIZ37024.1	ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology. (328 aa)
	atpE	ATP synthase; Produces ATP from ADP in the presence of a proton gradient across the membrane. (183 aa)
	AIZ37026.1	ATP synthase subunit K; Produces ATP from ADP in the presence of a proton gradient across the membrane; the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase proteolipid subunit family. (161 aa)
	AIZ37027.1	ATP synthase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family. (647 aa)

Your Current Organism:

Parvimonas micra

NCBI taxonomy Id: 33033
Other names: ATCC 33270, CCUG 17638, CCUG 17638 A, CCUG 46357, CIP 105294, DSM 20468, Diplococcus glycinophilus, JCM 12970, KCTC 5196, NCTC 11808, P. micra, Peptococcus glycinophilus, Peptostreptococcus micros, Streptococcus anaerobius micros, Streptococcus micros, VPI 5464, strain 3119B

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AIZ36288.1	AIZ36289.1	NW74_02430	NW74_02435	ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family.	0.998
AIZ36288.1	AIZ36290.1	NW74_02430	NW74_02440	ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase proteolipid subunit family.	0.998
AIZ36288.1	AIZ36291.1	NW74_02430	NW74_02445	ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.996
AIZ36288.1	AIZ36292.1	NW74_02430	NW74_02450	ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
AIZ36288.1	AIZ37024.1	NW74_02430	NW74_06645	ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.900
AIZ36288.1	AIZ37026.1	NW74_02430	NW74_06655	ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP synthase subunit K; Produces ATP from ADP in the presence of a proton gradient across the membrane; the K subunit is a nonenzymatic component which binds the dimeric form by interacting with the G and E subunits; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase proteolipid subunit family.	0.977
AIZ36288.1	AIZ37027.1	NW74_02430	NW74_06660	ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP synthase subunit I; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family.	0.975
AIZ36288.1	atpA	NW74_02430	NW74_02455	ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.	0.994
AIZ36288.1	atpA-2	NW74_02430	NW74_06635	ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP synthase subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.	0.975
AIZ36288.1	atpB	NW74_02430	NW74_02460	ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.	0.994
AIZ36288.1	atpB-2	NW74_02430	NW74_06630	ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP synthase subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.	0.977
AIZ36288.1	atpD	NW74_02430	NW74_02465	ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATPase; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.997
AIZ36288.1	atpD-2	NW74_02430	NW74_06625	ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP synthase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.972
AIZ36288.1	atpE	NW74_02430	NW74_06650	ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP synthase; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.977
AIZ36288.1	atpF	NW74_02430	NW74_06640	ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	ATP synthase subunit F; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.947
AIZ36289.1	AIZ36288.1	NW74_02435	NW74_02430	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family.	ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
AIZ36289.1	AIZ36290.1	NW74_02435	NW74_02440	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase proteolipid subunit family.	0.999
AIZ36289.1	AIZ36291.1	NW74_02435	NW74_02445	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family.	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.997
AIZ36289.1	AIZ36292.1	NW74_02435	NW74_02450	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.992
AIZ36289.1	AIZ37024.1	NW74_02435	NW74_06645	ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the V-ATPase 116 kDa subunit family.	ATP synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.975

page 1 of 12

Server load: low (14%) [HD]

Permalink

Network

Neighborhood

Experiments

Cooccurrence

Databases

Coexpression

Textmining

Fusion

© STRING Consortium 2025

Credits

Access

Info

About