STRINGSTRING
CDL18_07550 CDL18_07550 CDL18_07540 CDL18_07540 CDL18_07530 CDL18_07530 CDL18_07525 CDL18_07525 CDL18_07520 CDL18_07520 CDL18_07515 CDL18_07515 CDL25_13240 CDL25_13240 pduB pduB pduC pduC CDL18_12030 CDL18_12030 CDL25_05895 CDL25_05895 CDL18_12045 CDL18_12045 CDL23_06995 CDL23_06995 CDL18_13525 CDL18_13525 CDL18_13530 CDL18_13530 CDL18_13535 CDL18_13535
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CDL18_07550Unannotated protein. (182 aa)
CDL18_07540Unannotated protein. (88 aa)
CDL18_07530Unannotated protein. (151 aa)
CDL18_07525Unannotated protein. (94 aa)
CDL18_07520Unannotated protein. (93 aa)
CDL18_07515Unannotated protein. (117 aa)
CDL25_13240Unannotated protein. (173 aa)
pduBUnannotated protein. (241 aa)
pduCUnannotated protein. (554 aa)
CDL18_12030Unannotated protein. (222 aa)
CDL25_05895Unannotated protein. (130 aa)
CDL18_12045Unannotated protein. (109 aa)
CDL23_06995Unannotated protein; Belongs to the Cob(I)alamin adenosyltransferase family. (186 aa)
CDL18_13525Unannotated protein; Belongs to the EutP/PduV family. (175 aa)
CDL18_13530Unannotated protein. (142 aa)
CDL18_13535Unannotated protein. (121 aa)
Your Current Organism:
Ruminococcus gnavus
NCBI taxonomy Id: 33038
Other names: ATCC 29149, VPI C7-9, [. gnavus, [Ruminococcus] gnavus
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