(5 nodes) DNA biosynthetic process network (Ruminococcus torques)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:
	CUQ82494.1	DNA polymerase III subunit delta. (345 aa)
	dnaX_1	DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (530 aa)
	polC_2	DNA polymerase III polC-type. (231 aa)
	dnaE	DNA polymerase III subunit alpha. (1157 aa)
	dnaX_2	DNA polymerase III subunit tau. (331 aa)

Your Current Organism:

Ruminococcus torques

NCBI taxonomy Id: 33039
Other names: ATCC 27756, [. torques, [Ruminococcus] torques

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUQ82494.1	dnaE	ERS852502_00526	ERS852502_02681	DNA polymerase III subunit delta.	DNA polymerase III subunit alpha.	0.992
CUQ82494.1	dnaX_1	ERS852502_00526	ERS852502_00731	DNA polymerase III subunit delta.	DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.988
CUQ82494.1	dnaX_2	ERS852502_00526	ERS852502_02801	DNA polymerase III subunit delta.	DNA polymerase III subunit tau.	0.987
CUQ82494.1	polC_2	ERS852502_00526	ERS852502_00888	DNA polymerase III subunit delta.	DNA polymerase III polC-type.	0.916
dnaE	CUQ82494.1	ERS852502_02681	ERS852502_00526	DNA polymerase III subunit alpha.	DNA polymerase III subunit delta.	0.992
dnaE	dnaX_1	ERS852502_02681	ERS852502_00731	DNA polymerase III subunit alpha.	DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.988
dnaE	dnaX_2	ERS852502_02681	ERS852502_02801	DNA polymerase III subunit alpha.	DNA polymerase III subunit tau.	0.987
dnaE	polC_2	ERS852502_02681	ERS852502_00888	DNA polymerase III subunit alpha.	DNA polymerase III polC-type.	0.916
dnaX_1	CUQ82494.1	ERS852502_00731	ERS852502_00526	DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	DNA polymerase III subunit delta.	0.988
dnaX_1	dnaE	ERS852502_00731	ERS852502_02681	DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	DNA polymerase III subunit alpha.	0.988
dnaX_1	dnaX_2	ERS852502_00731	ERS852502_02801	DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	DNA polymerase III subunit tau.	0.929
dnaX_1	polC_2	ERS852502_00731	ERS852502_00888	DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	DNA polymerase III polC-type.	0.919
dnaX_2	CUQ82494.1	ERS852502_02801	ERS852502_00526	DNA polymerase III subunit tau.	DNA polymerase III subunit delta.	0.987
dnaX_2	dnaE	ERS852502_02801	ERS852502_02681	DNA polymerase III subunit tau.	DNA polymerase III subunit alpha.	0.987
dnaX_2	dnaX_1	ERS852502_02801	ERS852502_00731	DNA polymerase III subunit tau.	DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.929
dnaX_2	polC_2	ERS852502_02801	ERS852502_00888	DNA polymerase III subunit tau.	DNA polymerase III polC-type.	0.917
polC_2	CUQ82494.1	ERS852502_00888	ERS852502_00526	DNA polymerase III polC-type.	DNA polymerase III subunit delta.	0.916
polC_2	dnaE	ERS852502_00888	ERS852502_02681	DNA polymerase III polC-type.	DNA polymerase III subunit alpha.	0.916
polC_2	dnaX_1	ERS852502_00888	ERS852502_00731	DNA polymerase III polC-type.	DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity.	0.919
polC_2	dnaX_2	ERS852502_00888	ERS852502_02801	DNA polymerase III polC-type.	DNA polymerase III subunit tau.	0.917