STRINGSTRING
metA metA serC serC metB metB mdeA_2 mdeA_2 cysK cysK CUQ92164.1 CUQ92164.1 metC metC CUQ91742.1 CUQ91742.1 gutB_2 gutB_2 serA_2 serA_2 CUQ89691.1 CUQ89691.1 cysE cysE glyA glyA CUQ83044.1 CUQ83044.1 serS serS CUQ84165.1 CUQ84165.1 dfrD dfrD CUQ85880.1 CUQ85880.1 gutB_1 gutB_1 csd csd selD selD mdeA_1 mdeA_1 serA_1 serA_1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
metAHomoserine O-succinyltransferase; Transfers an acetyl group from acetyl-CoA to L-homoserine, forming acetyl-L-homoserine; Belongs to the MetA family. (306 aa)
serCPhosphoserine aminotransferase; Catalyzes the reversible conversion of 3- phosphohydroxypyruvate to phosphoserine and of 3-hydroxy-2-oxo-4- phosphonooxybutanoate to phosphohydroxythreonine. (360 aa)
metBCystathionine gamma-synthase. (243 aa)
mdeA_2Methionine gamma-lyase. (435 aa)
cysKCysteine synthase; Belongs to the cysteine synthase/cystathionine beta- synthase family. (310 aa)
CUQ92164.1PUA domain (predicted RNA-binding domain). (155 aa)
metCCystathionine beta-lyase metC. (131 aa)
CUQ91742.1Phosphoserine phosphatase. (200 aa)
gutB_2Sorbitol dehydrogenase. (342 aa)
serA_2D-3-phosphoglycerate dehydrogenase. (316 aa)
CUQ89691.1C_GCAxxG_C_C family protein. (137 aa)
cysESerine acetyltransferase. (231 aa)
glyAPyridoxal-phosphate-dependent serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. (411 aa)
CUQ83044.1Alcohol dehydrogenase. (344 aa)
serSSerine--tRNA ligase. (429 aa)
CUQ84165.1Serine dehydratase alpha chain; Belongs to the UPF0597 family. (429 aa)
dfrDDihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis. (162 aa)
CUQ85880.1Molybdopterin-guanine dinucleotide biosynthesis protein MobA. (462 aa)
gutB_1Sorbitol dehydrogenase. (404 aa)
csdProbable cysteine desulfurase. (375 aa)
selDSelenide%2C water dikinase. (293 aa)
mdeA_1Methionine gamma-lyase. (425 aa)
serA_1D-3-phosphoglycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (387 aa)
Your Current Organism:
Ruminococcus torques
NCBI taxonomy Id: 33039
Other names: ATCC 27756, [. torques, [Ruminococcus] torques
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