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dnaX_2 dnaX_2 nrnA_2 nrnA_2 dnaE dnaE rmlA1 rmlA1 CUQ90431.1 CUQ90431.1 ltrA_2 ltrA_2 ltrA_1 ltrA_1 CUQ89804.1 CUQ89804.1 CUQ89787.1 CUQ89787.1 CUQ89653.1 CUQ89653.1 dnaG dnaG ribF ribF pnp pnp rpoB rpoB rpoC rpoC glgC_4 glgC_4 glgC_3 glgC_3 glgC_2 glgC_2 glgC_1 glgC_1 polC_2 polC_2 dnaN dnaN dnaX_1 dnaX_1 rimN rimN rpoZ rpoZ yicC yicC CUQ82781.1 CUQ82781.1 glmU glmU CUQ82663.1 CUQ82663.1 CUQ82494.1 CUQ82494.1 cobU cobU ispD1 ispD1 polC_1 polC_1 galT galT polA polA dapH dapH CUQ80964.1 CUQ80964.1 dacA dacA thiI thiI rpfC_2 rpfC_2 coaD coaD cca cca nadD nadD dinB dinB rpoA rpoA cdsA cdsA
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
dnaX_2DNA polymerase III subunit tau. (331 aa)
nrnA_2Bifunctional oligoribonuclease and PAP phosphatase nrnA; Has phosphodiesterase (PDE) activity against cyclic-di-AMP (c-di-AMP); Belongs to the GdpP/PdeA phosphodiesterase family. (681 aa)
dnaEDNA polymerase III subunit alpha. (1157 aa)
rmlA1Glucose-1-phosphate thymidylyltransferase 1. (298 aa)
CUQ90431.1DNA primase (bacterial type). (325 aa)
ltrA_2Group II intron-encoded protein ltrA. (601 aa)
ltrA_1Group II intron-encoded protein ltrA. (607 aa)
CUQ89804.1Uncharacterised protein. (115 aa)
CUQ89787.1DNA primase (bacterial type). (323 aa)
CUQ89653.1Retron-type reverse transcriptase. (207 aa)
dnaGDNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. (592 aa)
ribFRiboflavin biosynthesis protein ribF; Belongs to the ribF family. (303 aa)
pnpPolyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. (695 aa)
rpoBDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1287 aa)
rpoCDNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1234 aa)
glgC_4Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (424 aa)
glgC_3Glucose-1-phosphate adenylyltransferase; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (372 aa)
glgC_2Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family. (379 aa)
glgC_1Glucose-1-phosphate adenylyltransferase. (371 aa)
polC_2DNA polymerase III polC-type. (231 aa)
dnaNDNA polymerase III subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] (369 aa)
dnaX_1DNA polymerase III subunit tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. (530 aa)
rimNt(6)A37 threonylcarbamoyladenosine biosynthesis protein RimN; Belongs to the SUA5 family. (508 aa)
rpoZDNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. (81 aa)
yicCYicC-like family%2C N-terminal region. (292 aa)
CUQ82781.1UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. (300 aa)
glmUBifunctional protein GlmU. (224 aa)
CUQ82663.1UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. (306 aa)
CUQ82494.1DNA polymerase III subunit delta. (345 aa)
cobUAdenosylcobinamide kinase. (330 aa)
ispD12-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). (230 aa)
polC_1DNA polymerase III polC-type. (1519 aa)
galTGalactose-1-phosphate uridylyltransferase. (496 aa)
polADNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity. (871 aa)
dapH2%2C3%2C4%2C5-tetrahydropyridine-2%2C6-dicarboxy late N-acetyltransferase. (189 aa)
CUQ80964.1UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. (304 aa)
dacADNA integrity scanning protein DisA; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria. (288 aa)
thiIProbable tRNA sulfurtransferase; Catalyzes the ATP-dependent transfer of a sulfur to tRNA to produce 4-thiouridine in position 8 of tRNAs, which functions as a near-UV photosensor. Also catalyzes the transfer of sulfur to the sulfur carrier protein ThiS, forming ThiS-thiocarboxylate. This is a step in the synthesis of thiazole, in the thiamine biosynthesis pathway. The sulfur is donated as persulfide by IscS. (396 aa)
rpfC_2Sensory/regulatory protein RpfC. (1057 aa)
coaDPhosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family. (163 aa)
ccaCCA-adding enzyme. (446 aa)
nadDNicotinate-nucleotide adenylyltransferase. (226 aa)
dinBDNA polymerase IV; Poorly processive, error-prone DNA polymerase involved in untargeted mutagenesis. Copies undamaged DNA at stalled replication forks, which arise in vivo from mismatched or misaligned primer ends. These misaligned primers can be extended by PolIV. Exhibits no 3'-5' exonuclease (proofreading) activity. May be involved in translesional synthesis, in conjunction with the beta clamp from PolIII. (411 aa)
rpoADNA-directed RNA polymerase subunit alpha. (319 aa)
cdsAPhosphatidate cytidylyltransferase; Belongs to the CDS family. (270 aa)
Your Current Organism:
Ruminococcus torques
NCBI taxonomy Id: 33039
Other names: ATCC 27756, [. torques, [Ruminococcus] torques
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