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CUQ85847.1 CUQ85847.1 cutS cutS deoC deoC yfkN_1 yfkN_1 xseB xseB xseA xseA pnp pnp dut dut nfrA2 nfrA2 CUQ90100.1 CUQ90100.1 hcrC hcrC hcrA_2 hcrA_2 rdgB rdgB nudC nudC CUQ91638.1 CUQ91638.1 yfkN_2 yfkN_2 yfkN_3 yfkN_3 CUQ92522.1 CUQ92522.1 nfdA nfdA cdd cdd udp_2 udp_2 deoB deoB hcrA_1 hcrA_1 abgB abgB rnhB rnhB cutM cutM adeC adeC udp_1 udp_1 yicC yicC drgA drgA rnhA_1 rnhA_1 CUQ82361.1 CUQ82361.1 mtnN mtnN rny rny mop mop
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
CUQ85847.1Xanthine dehydrogenase accessory protein XdhC. (324 aa)
cutSCarbon monoxide dehydrogenase small chain. (168 aa)
deoCDeoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. (221 aa)
yfkN_1Trifunctional nucleotide phosphoesterase protein YfkN precursor; Belongs to the 5'-nucleotidase family. (649 aa)
xseBExodeoxyribonuclease VII small subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseB family. (74 aa)
xseAExodeoxyribonuclease 7 large subunit; Bidirectionally degrades single-stranded DNA into large acid- insoluble oligonucleotides, which are then degraded further into small acid-soluble oligonucleotides; Belongs to the XseA family. (410 aa)
pnpPolyribonucleotide nucleotidyltransferase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3'- to 5'- direction. (695 aa)
dutDeoxyuridine 5'-triphosphate nucleotidohydrolase; This enzyme is involved in nucleotide metabolism: it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA. (172 aa)
nfrA2FMN reductase [NAD(P)H]. (172 aa)
CUQ90100.1Putative oxidoreductase. (271 aa)
hcrC4-hydroxybenzoyl-CoA reductase subunit gamma. (164 aa)
hcrA_24-hydroxybenzoyl-CoA reductase subunit alpha. (788 aa)
rdgBdITP/XTP pyrophosphatase; Pyrophosphatase that catalyzes the hydrolysis of nucleoside triphosphates to their monophosphate derivatives, with a high preference for the non-canonical purine nucleotides XTP (xanthosine triphosphate), dITP (deoxyinosine triphosphate) and ITP. Seems to function as a house-cleaning enzyme that removes non-canonical purine nucleotides from the nucleotide pool, thus preventing their incorporation into DNA/RNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family. (204 aa)
nudCNADH pyrophosphatase. (278 aa)
CUQ91638.1Ureidoglycolate hydrolase. (162 aa)
yfkN_2Trifunctional nucleotide phosphoesterase protein YfkN precursor; Belongs to the 5'-nucleotidase family. (620 aa)
yfkN_3Trifunctional nucleotide phosphoesterase protein YfkN precursor. (488 aa)
CUQ92522.1Nitroreductase A. (178 aa)
nfdAN-substituted formamide deformylase precursor. (517 aa)
cddCytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (139 aa)
udp_2Uridine phosphorylase; Catalyzes the reversible phosphorylytic cleavage of uridine and deoxyuridine to uracil and ribose- or deoxyribose-1-phosphate. The produced molecules are then utilized as carbon and energy sources or in the rescue of pyrimidine bases for nucleotide synthesis. Belongs to the PNP/UDP phosphorylase family. (260 aa)
deoBPhosphopentomutase; Phosphotransfer between the C1 and C5 carbon atoms of pentose; Belongs to the phosphopentomutase family. (396 aa)
hcrA_14-hydroxybenzoyl-CoA reductase subunit alpha. (769 aa)
abgBAminobenzoyl-glutamate utilization protein B. (438 aa)
rnhBRibonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (252 aa)
cutMCarbon monoxide dehydrogenase medium chain. (295 aa)
adeCAdenine deaminase. (582 aa)
udp_1Uridine phosphorylase. (260 aa)
yicCYicC-like family%2C N-terminal region. (292 aa)
drgANitroreductase A. (178 aa)
rnhA_1Ribonuclease HI; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. (157 aa)
CUQ82361.1Phosphodiesterase. (163 aa)
mtnN5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase; Catalyzes the irreversible cleavage of the glycosidic bond in both 5'-methylthioadenosine (MTA) and S-adenosylhomocysteine (SAH/AdoHcy) to adenine and the corresponding thioribose, 5'- methylthioribose and S-ribosylhomocysteine, respectively. Belongs to the PNP/UDP phosphorylase family. MtnN subfamily. (230 aa)
rnyRibonuclease Y. (519 aa)
mopAldehyde oxidoreductase. (860 aa)
Your Current Organism:
Ruminococcus torques
NCBI taxonomy Id: 33039
Other names: ATCC 27756, [. torques, [Ruminococcus] torques
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