STRINGSTRING
accD accD tdcB tdcB ispG ispG ispF ispF ispD1 ispD1 bioD1 bioD1 bioA bioA bioF bioF ypfD ypfD eno_1 eno_1 iadA iadA pfkA_1 pfkA_1 panC panC panD panD CUQ84165.1 CUQ84165.1 crnA crnA CUQ84295.1 CUQ84295.1 coaBC coaBC CUQ84441.1 CUQ84441.1 CUQ84782.1 CUQ84782.1 ispE ispE aroE_1 aroE_1 fadD_1 fadD_1 pgk pgk tpiA tpiA gpmI gpmI pyk pyk plsX plsX acpP_1 acpP_1 acpA acpA bioB bioB dpaL dpaL panE panE dxr dxr accC accC fabZ fabZ accB accB fabF fabF fabD fabD acpP_2 acpP_2 fabH fabH hcrA_1 hcrA_1 cutM cutM cutS cutS CUQ88140.1 CUQ88140.1 rpsA rpsA ispH ispH CUQ88565.1 CUQ88565.1 accD5 accD5 CUQ88790.1 CUQ88790.1 pfp pfp pgi pgi dkgA dkgA eno_2 eno_2 hcrC hcrC hcrA_2 hcrA_2 ppdK ppdK bacD bacD thiH_2 thiH_2 iolS iolS garD garD aroE_2 aroE_2 yvgN yvgN CUQ92546.1 CUQ92546.1 aroE_3 aroE_3 fadB2 fadB2 thlA thlA pfkA_2 pfkA_2 CUQ92838.1 CUQ92838.1 nfdA nfdA aroD aroD
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
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textmining
co-expression
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accDAcetyl-coenzyme A carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (572 aa)
tdcBL-threonine dehydratase catabolic TdcB. (404 aa)
ispG4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase. (373 aa)
ispF2-C-methyl-D-erythritol 2%2C4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4-diphosphocytidyl-2- C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP). (179 aa)
ispD12-C-methyl-D-erythritol 4-phosphate cytidylyltransferase 1; Catalyzes the formation of 4-diphosphocytidyl-2-C-methyl-D- erythritol from CTP and 2-C-methyl-D-erythritol 4-phosphate (MEP). (230 aa)
bioD1ATP-dependent dethiobiotin synthetase BioD 1; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. (227 aa)
bioAAdenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (401 aa)
bioF8-amino-7-oxononanoate synthase; Catalyzes the decarboxylative condensation of pimeloyl-[acyl- carrier protein] and L-alanine to produce 8-amino-7-oxononanoate (AON), [acyl-carrier protein], and carbon dioxide. Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. BioF subfamily. (644 aa)
ypfD30S ribosomal protein S1 homolog. (231 aa)
eno_1Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. (431 aa)
iadAIsoaspartyl dipeptidase; Catalyzes the hydrolytic cleavage of a subset of L- isoaspartyl (L-beta-aspartyl) dipeptides. Used to degrade proteins damaged by L-isoaspartyl residues formation. Belongs to the peptidase M38 family. (382 aa)
pfkA_16-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis; Belongs to the phosphofructokinase type A (PFKA) family. Mixed-substrate PFK group III subfamily. (359 aa)
panCPantothenate synthetase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. (279 aa)
panDAspartate 1-decarboxylase precursor; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. (130 aa)
CUQ84165.1Serine dehydratase alpha chain; Belongs to the UPF0597 family. (429 aa)
crnACreatinine amidohydrolase. (247 aa)
CUQ84295.1D-alanine--poly(phosphoribitol) ligase subunit 2. (75 aa)
coaBCDNA/pantothenate metabolism flavoprotein; Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4- phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine; In the C-terminal section; belongs to the PPC synthetase family. (399 aa)
CUQ84441.12-dehydropantoate 2-reductase. (300 aa)
CUQ84782.1Acyl-ACP thioesterase. (236 aa)
ispE4-diphosphocytidyl-2-C-methyl-D-erythritol kinase; Catalyzes the phosphorylation of the position 2 hydroxy group of 4-diphosphocytidyl-2C-methyl-D-erythritol. (291 aa)
aroE_1Shikimate dehydrogenase. (291 aa)
fadD_1Long-chain-fatty-acid--CoA ligase. (510 aa)
pgkPhosphoglycerate kinase; Belongs to the phosphoglycerate kinase family. (399 aa)
tpiATriosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. (249 aa)
gpmI2%2C3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (512 aa)
pykPyruvate kinase; Belongs to the pyruvate kinase family. (478 aa)
plsXPhosphate acyltransferase; Catalyzes the reversible formation of acyl-phosphate (acyl- PO(4)) from acyl-[acyl-carrier-protein] (acyl-ACP). This enzyme utilizes acyl-ACP as fatty acyl donor, but not acyl-CoA. (347 aa)
acpP_1Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (79 aa)
acpAAcyl carrier protein. (74 aa)
bioBBiotin synthase; Catalyzes the conversion of dethiobiotin (DTB) to biotin by the insertion of a sulfur atom into dethiobiotin via a radical-based mechanism; Belongs to the radical SAM superfamily. Biotin synthase family. (331 aa)
dpaLDiaminopropionate ammonia-lyase. (401 aa)
panE2-dehydropantoate 2-reductase; Catalyzes the NADPH-dependent reduction of ketopantoate into pantoic acid. (318 aa)
dxr1-deoxy-D-xylulose 5-phosphate reductoisomerase; Catalyzes the NADP-dependent rearrangement and reduction of 1-deoxy-D-xylulose-5-phosphate (DXP) to 2-C-methyl-D-erythritol 4- phosphate (MEP); Belongs to the DXR family. (380 aa)
accCBiotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (449 aa)
fabZ(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase; Involved in unsaturated fatty acids biosynthesis. Catalyzes the dehydration of short chain beta-hydroxyacyl-ACPs and long chain saturated and unsaturated beta-hydroxyacyl-ACPs. (143 aa)
accBBiotin carboxyl carrier protein of acetyl-CoA carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA. (163 aa)
fabF3-oxoacyl-[acyl-carrier-protein] synthase 2; Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. (412 aa)
fabDMalonyl CoA-acyl carrier protein transacylase. (306 aa)
acpP_2Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis. (91 aa)
fabH3-oxoacyl-[acyl-carrier-protein] synthase 3; Belongs to the thiolase-like superfamily. FabH family. (315 aa)
hcrA_14-hydroxybenzoyl-CoA reductase subunit alpha. (769 aa)
cutMCarbon monoxide dehydrogenase medium chain. (295 aa)
cutSCarbon monoxide dehydrogenase small chain. (168 aa)
CUQ88140.1Putative mercuric reductase. (406 aa)
rpsA30S ribosomal protein S1. (358 aa)
ispH4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Catalyzes the conversion of 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate (HMBPP) into a mixture of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP). Acts in the terminal step of the DOXP/MEP pathway for isoprenoid precursor biosynthesis. Belongs to the IspH family. (284 aa)
CUQ88565.1Tricarballylate dehydrogenase. (411 aa)
accD5Probable propionyl-CoA carboxylase beta chain 5. (479 aa)
CUQ88790.1Oleate hydratase. (665 aa)
pfpPyrophosphate--fructose 6-phosphate 1-phosphotransferase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. (417 aa)
pgiGlucose-6-phosphate isomerase; Belongs to the GPI family. (526 aa)
dkgA2%2C5-diketo-D-gluconic acid reductase A. (334 aa)
eno_2Enolase. (232 aa)
hcrC4-hydroxybenzoyl-CoA reductase subunit gamma. (164 aa)
hcrA_24-hydroxybenzoyl-CoA reductase subunit alpha. (788 aa)
ppdKPyruvate%2C phosphate dikinase; Belongs to the PEP-utilizing enzyme family. (876 aa)
bacDAlanine-anticapsin ligase BacD. (405 aa)
thiH_22-iminoacetate synthase. (357 aa)
iolS2%2C5-diketo-D-gluconate reductase B. (285 aa)
garDD-galactarate dehydratase. (505 aa)
aroE_2Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). (291 aa)
yvgNGlyoxal reductase. (281 aa)
CUQ92546.1Putative 2-hydroxyacid dehydrogenase HI_1556; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. (310 aa)
aroE_3Shikimate dehydrogenase; Belongs to the shikimate dehydrogenase family. (104 aa)
fadB23-hydroxybutyryl-CoA dehydrogenase. (292 aa)
thlAAcetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. (393 aa)
pfkA_26-phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate to fructose 1,6-bisphosphate by ATP, the first committing step of glycolysis. (339 aa)
CUQ92838.1Uncharacterised ACR%2C YkgG family COG1556. (211 aa)
nfdAN-substituted formamide deformylase precursor. (517 aa)
aroD3-dehydroquinate dehydratase; Involved in the third step of the chorismate pathway, which leads to the biosynthesis of aromatic amino acids. Catalyzes the cis- dehydration of 3-dehydroquinate (DHQ) and introduces the first double bond of the aromatic ring to yield 3-dehydroshikimate. Belongs to the type-I 3-dehydroquinase family. (253 aa)
Your Current Organism:
Ruminococcus torques
NCBI taxonomy Id: 33039
Other names: ATCC 27756, [. torques, [Ruminococcus] torques
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