(25 nodes) Innate Immune System network (Ruminococcus torques)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

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second shell of interactors

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proteins of unknown 3D structure

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a 3D structure is known or predicted

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Known Interactions

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experimentally determined

Predicted Interactions

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Your Input:
	CUQ92727.1	V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family. (644 aa)
	CUQ92719.1	V-type ATP synthase subunit F. (102 aa)
	slyD	FKBP-type peptidyl-prolyl cis-trans isomerase slyD. (331 aa)
	CUQ91246.1	V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family. (676 aa)
	atpE-2	V-type ATP synthase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane. (200 aa)
	ntpC	V-type sodium pump subunit C. (324 aa)
	ntpG	V-type sodium pump subunit G. (108 aa)
	ntpA	V-type sodium ATPase catalytic subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family. (588 aa)
	ntpB_1	V-type sodium pump subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. (457 aa)
	ntpD	V-type sodium pump subunit D. (220 aa)
	xpt	Xanthine phosphoribosyltransferase; Converts the preformed base xanthine, a product of nucleic acid breakdown, to xanthosine 5'-monophosphate (XMP), so it can be reused for RNA or DNA synthesis. (197 aa)
	uidA	Beta-glucuronidase. (795 aa)
	pgi	Glucose-6-phosphate isomerase; Belongs to the GPI family. (526 aa)
	lacZ	Beta-galactosidase. (1012 aa)
	deoC	Deoxyribose-phosphate aldolase; Catalyzes a reversible aldol reaction between acetaldehyde and D-glyceraldehyde 3-phosphate to generate 2-deoxy-D-ribose 5- phosphate; Belongs to the DeoC/FbaB aldolase family. DeoC type 1 subfamily. (221 aa)
	sbcD	Nuclease sbcCD subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3'->5' double strand exonuclease that can open hairpins. It also has a 5' single-strand endonuclease activity; Belongs to the SbcD family. (386 aa)
	serS	Serine--tRNA ligase. (429 aa)
	pdxK	Pyridoxine kinase. (277 aa)
	ntpB_2	V-type sodium pump subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit. (461 aa)
	atpA_2	V-type ATP synthase alpha chain. (589 aa)
	CUQ92716.1	V-type ATP synthase subunit E. (195 aa)
	atpD_2	V-ATPase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane. (209 aa)
	pncB2	Nicotinate phosphoribosyltransferase 2; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. (482 aa)
	cdd	Cytidine deaminase; This enzyme scavenges exogenous and endogenous cytidine and 2'-deoxycytidine for UMP synthesis; Belongs to the cytidine and deoxycytidylate deaminase family. (139 aa)
	CUQ92731.1	V-type ATP synthase subunit C. (348 aa)

Your Current Organism:

Ruminococcus torques

NCBI taxonomy Id: 33039
Other names: ATCC 27756, [. torques, [Ruminococcus] torques

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CUQ91246.1	CUQ92716.1	ERS852502_02377	ERS852502_02693	V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	V-type ATP synthase subunit E.	0.982
CUQ91246.1	CUQ92719.1	ERS852502_02377	ERS852502_02694	V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	V-type ATP synthase subunit F.	0.965
CUQ91246.1	CUQ92727.1	ERS852502_02377	ERS852502_02696	V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	0.905
CUQ91246.1	CUQ92731.1	ERS852502_02377	ERS852502_02697	V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	V-type ATP synthase subunit C.	0.983
CUQ91246.1	atpA_2	ERS852502_02377	ERS852502_02692	V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	V-type ATP synthase alpha chain.	0.989
CUQ91246.1	atpD_2	ERS852502_02377	ERS852502_02690	V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	V-ATPase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.971
CUQ91246.1	atpE-2	ERS852502_02377	ERS852502_02375	V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	V-type ATP synthase subunit E; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998
CUQ91246.1	ntpA	ERS852502_02377	ERS852502_02372	V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	V-type sodium ATPase catalytic subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.	0.998
CUQ91246.1	ntpB_1	ERS852502_02377	ERS852502_02371	V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	V-type sodium pump subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.	0.997
CUQ91246.1	ntpB_2	ERS852502_02377	ERS852502_02691	V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	V-type sodium pump subunit B; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type beta chain is a regulatory subunit.	0.985
CUQ91246.1	ntpC	ERS852502_02377	ERS852502_02374	V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	V-type sodium pump subunit C.	0.998
CUQ91246.1	ntpD	ERS852502_02377	ERS852502_02370	V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	V-type sodium pump subunit D.	0.996
CUQ91246.1	ntpG	ERS852502_02377	ERS852502_02373	V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	V-type sodium pump subunit G.	0.997
CUQ92716.1	CUQ91246.1	ERS852502_02693	ERS852502_02377	V-type ATP synthase subunit E.	V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	0.982
CUQ92716.1	CUQ92719.1	ERS852502_02693	ERS852502_02694	V-type ATP synthase subunit E.	V-type ATP synthase subunit F.	0.997
CUQ92716.1	CUQ92727.1	ERS852502_02693	ERS852502_02696	V-type ATP synthase subunit E.	V-type ATP synthase subunit I; Belongs to the V-ATPase 116 kDa subunit family.	0.997
CUQ92716.1	CUQ92731.1	ERS852502_02693	ERS852502_02697	V-type ATP synthase subunit E.	V-type ATP synthase subunit C.	0.998
CUQ92716.1	atpA_2	ERS852502_02693	ERS852502_02692	V-type ATP synthase subunit E.	V-type ATP synthase alpha chain.	0.996
CUQ92716.1	atpD_2	ERS852502_02693	ERS852502_02690	V-type ATP synthase subunit E.	V-ATPase subunit D; Produces ATP from ADP in the presence of a proton gradient across the membrane.	0.998
CUQ92716.1	ntpA	ERS852502_02693	ERS852502_02372	V-type ATP synthase subunit E.	V-type sodium ATPase catalytic subunit A; Produces ATP from ADP in the presence of a proton gradient across the membrane. The V-type alpha chain is a catalytic subunit. Belongs to the ATPase alpha/beta chains family.	0.983