STRINGSTRING
kdpD kdpD phoR_9 phoR_9 yycG_6 yycG_6 phoR_8 phoR_8 yycG_5 yycG_5 graS_3 graS_3 phoR_7 phoR_7 phoR_6 phoR_6 luxQ luxQ yycG_4 yycG_4 walK_2 walK_2 phoR_5 phoR_5 yycG_3 yycG_3 graS_2 graS_2 phoR_4 phoR_4 phoR_3 phoR_3 walK_1 walK_1 rpfC_2 rpfC_2 senX3_2 senX3_2 senX3_1 senX3_1 phoR_2 phoR_2 yycG_2 yycG_2 creC creC tcrY tcrY phoR_1 phoR_1 arlS arlS cssS cssS cusS cusS graS_1 graS_1 kinE kinE yycG_1 yycG_1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
kdpDSensor protein KdpD. (444 aa)
phoR_9Alkaline phosphatase synthesis sensor protein phoR. (378 aa)
yycG_6Sensor histidine kinase YycG. (313 aa)
phoR_8Alkaline phosphatase synthesis sensor protein phoR. (301 aa)
yycG_5Sensor histidine kinase YycG. (467 aa)
graS_3Sensor histidine kinase graS. (327 aa)
phoR_7Alkaline phosphatase synthesis sensor protein phoR. (346 aa)
phoR_6Alkaline phosphatase synthesis sensor protein phoR. (907 aa)
luxQAutoinducer 2 sensor kinase/phosphatase luxQ. (696 aa)
yycG_4Sensor histidine kinase YycG. (712 aa)
walK_2Sensor protein kinase walK. (501 aa)
phoR_5Alkaline phosphatase synthesis sensor protein phoR. (439 aa)
yycG_3Sensor histidine kinase YycG. (305 aa)
graS_2Sensor histidine kinase graS. (337 aa)
phoR_4Alkaline phosphatase synthesis sensor protein phoR. (343 aa)
phoR_3Alkaline phosphatase synthesis sensor protein phoR. (342 aa)
walK_1Sensor protein kinase walK. (317 aa)
rpfC_2Sensory/regulatory protein RpfC. (1057 aa)
senX3_2Signal-transduction histidine kinase senX3. (335 aa)
senX3_1Signal-transduction histidine kinase senX3. (421 aa)
phoR_2Alkaline phosphatase synthesis sensor protein phoR. (524 aa)
yycG_2Sensor histidine kinase YycG. (352 aa)
creCSensor protein CreC. (458 aa)
tcrYProbable sensor histidine kinase TcrY. (299 aa)
phoR_1Alkaline phosphatase synthesis sensor protein phoR. (343 aa)
arlSSignal transduction histidine-protein kinase ArlS. (413 aa)
cssSSensor histidine kinase CssS. (393 aa)
cusSSensor kinase CusS. (450 aa)
graS_1Sensor histidine kinase graS. (348 aa)
kinESporulation kinase E. (247 aa)
yycG_1Sensor histidine kinase YycG. (457 aa)
Your Current Organism:
Ruminococcus torques
NCBI taxonomy Id: 33039
Other names: ATCC 27756, [. torques, [Ruminococcus] torques
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