STRINGSTRING
accD accD OAG83371.1 OAG83371.1 Prc Prc accA accA OAG93020.1 OAG93020.1 OAG92104.1 OAG92104.1 FadB1 FadB1 Ech1 Ech1 SohB SohB OAG92281.1 OAG92281.1 Mccc2 Mccc2 CtpA CtpA OAG82878.1 OAG82878.1 OAG82877.1 OAG82877.1 fadB fadB OAG88206.1 OAG88206.1 OAG83486.1 OAG83486.1 clpP clpP
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
accDacetyl-CoA carboxylase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. (306 aa)
OAG83371.1Peptidase S49; Derived by automated computational analysis using gene prediction method: Protein Homology. (332 aa)
PrcPeptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. (704 aa)
accAacetyl-CoA carboxylase subunit alpha; Component of the acetyl coenzyme A carboxylase (ACC) complex. First, biotin carboxylase catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the carboxyltransferase to acetyl-CoA to form malonyl-CoA. (315 aa)
OAG93020.1Clp protease ClpP; Derived by automated computational analysis using gene prediction method: Protein Homology. (376 aa)
OAG92104.1enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology. (229 aa)
FadB1enoyl-CoA hydratase; Catalyzes the reversible hydration of unsaturated fatty acyl-CoA to beta-hydroxyacyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (257 aa)
Ech1enoyl-CoA hydratase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (270 aa)
SohBPeptidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (341 aa)
OAG92281.1Catalyzes the hydration of gamma-carboxygeranoyl-CoA to 3-hydroxy-gamma-carboxygeranoyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (279 aa)
Mccc2methylcrotonoyl-CoA carboxylase; Derived by automated computational analysis using gene prediction method: Protein Homology. (535 aa)
CtpAPeptidase S41; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the peptidase S41A family. (443 aa)
OAG82878.1Malonate decarboxylase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology. (266 aa)
OAG82877.1The beta subunit catalyzes the decarboxylation of the malonyl moiety on coenzyme A; Derived by automated computational analysis using gene prediction method: Protein Homology. (283 aa)
fadBMultifunctional fatty acid oxidation complex subunit alpha; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the N-terminal section; belongs to the enoyl-CoA hydratase/isomerase family. (715 aa)
OAG88206.1P-hydroxycinnamoyl CoA hydratase/lyase; Catalyzes the conversion of feruloyl-CoA to vanillin and acetyl-CoA; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the enoyl-CoA hydratase/isomerase family. (276 aa)
OAG83486.1Crotonase; Derived by automated computational analysis using gene prediction method: Protein Homology. (365 aa)
clpPClp protease ClpP; Cleaves peptides in various proteins in a process that requires ATP hydrolysis. Has a chymotrypsin-like activity. Plays a major role in the degradation of misfolded proteins. Belongs to the peptidase S14 family. (213 aa)
Your Current Organism:
Pseudomonas viridiflava
NCBI taxonomy Id: 33069
Other names: ATCC 13223, CECT 458, CFBP 2107, CIP 106699, DSM 11124, DSM 6694, ICMP 2848, LMG 2352, LMG:2352, NCPPB 635, NRRL B-895, P. viridiflava, Phytomonas viridiflava, Pseudomonas sp. 286, Pseudomonas syringae group genomosp. 6
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