STRINGSTRING
AKO52280.1 AKO52280.1 AKO52281.1 AKO52281.1 AKO52282.1 AKO52282.1 AKO54249.1 AKO54249.1 AKO52790.1 AKO52790.1 AKO52791.1 AKO52791.1 AKO54320.1 AKO54320.1 AKO52792.1 AKO52792.1 AKO53510.1 AKO53510.1 AKO53511.1 AKO53511.1 AKO53512.1 AKO53512.1
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
AKO52280.1Amino acid ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. (267 aa)
AKO52281.1Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)
AKO52282.1Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (217 aa)
AKO54249.1Amino acid ABC transporter ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)
AKO52790.1ABC transporter substrate-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (275 aa)
AKO52791.1Amino acid ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology. (218 aa)
AKO54320.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (220 aa)
AKO52792.1ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (272 aa)
AKO53510.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the bacterial solute-binding protein 3 family. (252 aa)
AKO53511.1Nickel transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (223 aa)
AKO53512.1Peptide ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (248 aa)
Your Current Organism:
Marinobacter psychrophilus
NCBI taxonomy Id: 330734
Other names: CGMCC 1.6499, JCM 14643, M. psychrophilus, Marinobacter psychrophilus Zhang et al. 2008, Marinobacter sp. BSi20041, strain 20041
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